RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 HMX2A2RU54 273 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 HS6ST1O60243 411 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 FGF17O60258 216 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 GUCY1B2O75343 617 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 OR6B1O95007 311 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 SEMA3DO95025 777 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 CLDN14O95500 239 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 TPOP07202 933 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 GSTA1P08263 222 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 NR2F6P10588 404 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 COX6B1P14854 86 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 ALOX15P16050 662 aaPredicted RBP9.66□□□□□ -0.86
NR1I3-222ENST00000506018 PTGER4P35408 488 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 IGLV3-21P80748 117 aaPredicted RBP9.66□□□□□ -0.86
NR1I3-222ENST00000506018 ID2Q02363 134 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 FOLH1Q04609 750 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 ZNF630Q2M218 657 aaPredicted RBP9.66□□□□□ -0.86
NR1I3-222ENST00000506018 MPEG1Q2M385 716 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 FAM47EQ6ZV65 393 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 MDGA2Q7Z553 956 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 TRABD2AQ86V40 505 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 TICAM1Q8IUC6 712 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 SRRM1Q8IYB3 904 aaKnown RBP9.66□□□□□ -0.86
NR1I3-222ENST00000506018 ST13P4Q8IZP2 240 aaPredicted RBP9.66□□□□□ -0.86
NR1I3-222ENST00000506018 SLC15A4Q8N697 577 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 FAM57AQ8TBR7 257 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 ISL2Q96A47 359 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 ANKRD9Q96BM1 317 aaPredicted RBP9.66□□□□□ -0.86
NR1I3-222ENST00000506018 PHF21BQ96EK2 531 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 SENP5Q96HI0 755 aaPredicted RBP9.66□□□□□ -0.86
NR1I3-222ENST00000506018 FBXL20Q96IG2 436 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 MRPL57Q9BQC6 102 aaKnown RBP9.66□□□□□ -0.86
NR1I3-222ENST00000506018 FAM173AQ9BQD7 235 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 NTMT1Q9BV86 223 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 DDX31Q9H8H2 851 aaKnown RBP9.66□□□□□ -0.86
NR1I3-222ENST00000506018 LIN28AQ9H9Z2 209 aaKnown RBP9.66□□□□□ -0.86
NR1I3-222ENST00000506018 SSU72Q9NP77 194 aaKnown RBP9.66□□□□□ -0.86
NR1I3-222ENST00000506018 NMRK1Q9NWW6 199 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 XPR1Q9UBH6 696 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 PKDREJQ9NTG1 2253 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 ITPR2Q14571 2701 aa9.66□□□□□ -0.86
NR1I3-222ENST00000506018 A0A1B0GTH9 108 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 OR6C76A6NM76 312 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 CAPN14A8MX76 684 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 COPEO14579 308 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 PROM1O43490 865 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 PRKNO60260 465 aaPredicted RBP9.65□□□□□ -0.86
NR1I3-222ENST00000506018 SIX3O95343 332 aaPredicted RBP9.65□□□□□ -0.86
NR1I3-222ENST00000506018 GPR75O95800 540 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 OTCP00480 354 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 FAM58BPP0C7Q3 252 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 KRT4P19013 534 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 TAC1P20366 129 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 CNR1P21554 472 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 PIK3R1P27986 724 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 GALNSP34059 522 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 PTGER1P34995 402 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 RFC3P40938 356 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 MAGOHP61326 146 aaKnown RBP9.65□□□□□ -0.86
NR1I3-222ENST00000506018 PPIAP62937 165 aaKnown RBP9.65□□□□□ -0.86
NR1I3-222ENST00000506018 HSF1Q00613 529 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 SPRED3Q2MJR0 410 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 TNFAIP8L3Q5GJ75 292 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 RNFT1Q5M7Z0 435 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 FRG2Q64ET8 278 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 OR52E8Q6IFG1 317 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 RNF111Q6ZNA4 994 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 MILR1Q7Z6M3 343 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 DOLPP1Q86YN1 238 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 OR4N5Q8IXE1 308 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 PLD6Q8N2A8 252 aaKnown RBP9.65□□□□□ -0.86
NR1I3-222ENST00000506018 OR2M7Q8NG81 312 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 WDR20Q8TBZ3 569 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 ZNF721Q8TF20 911 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 CA5BP1Q8WTZ4 195 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 RIT1Q92963 219 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 TLCD1Q96CP7 247 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 GPR78Q96P69 363 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 FRG2BQ96QU4 278 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 CNPPD1Q9BV87 410 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 SORBS1Q9BX66 1292 aaKnown RBP9.65□□□□□ -0.86
NR1I3-222ENST00000506018 MRPL46Q9H2W6 279 aaKnown RBP9.65□□□□□ -0.86
NR1I3-222ENST00000506018 TP63Q9H3D4 680 aaPredicted RBP9.65□□□□□ -0.86
NR1I3-222ENST00000506018 ELOVL6Q9H5J4 265 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 GRID1Q9ULK0 1009 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 RNF11Q9Y3C5 154 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 ATG4BQ9Y4P1 393 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 NINQ8N4C6 2090 aa9.65□□□□□ -0.86
NR1I3-222ENST00000506018 CELSR2Q9HCU4 2923 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 A0A0A6YYD5 115 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 TMEM200CA6NKL6 621 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 GLRA3O75311 464 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 ETHE1O95571 254 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 SERPINB3P29508 390 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 BSGP35613 385 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 MAGEA12P43365 314 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 SLC18A1P54219 525 aa9.64□□□□□ -0.87
NR1I3-222ENST00000506018 HNRNPH2P55795 449 aaKnown RBP9.64□□□□□ -0.87
NR1I3-222ENST00000506018 RPP38P78345 283 aaKnown RBP9.64□□□□□ -0.87
NR1I3-222ENST00000506018 ADORA2A-AS1P86434 159 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms