RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 CARMIL1Q5VZK9 1371 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 CACNA1IQ9P0X4 2223 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 PLSCR5A0PG75 271 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 MBLAC1A4D2B0 266 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 EME2A4GXA9 379 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 RNF222A6NCQ9 220 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 SRRM4A7MD48 611 aaKnown RBP3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 H0Y8G0 127 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 B4GAT1O43505 415 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 SEC24AO95486 1093 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 ANP32DO95626 131 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 ATP1A1P05023 1023 aaKnown RBP3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 FCER2P06734 321 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 GPIP06744 558 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 ANXA4P09525 319 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 IQCF3P0C7M6 154 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 TOP1P11387 765 aaKnown RBP3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 PAX1P15863 534 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 CALB2P22676 271 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 PSMA2P25787 234 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 TRIM23P36406 574 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 DLSTP36957 453 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 ACADVLP49748 655 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 FHITP49789 147 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 NDST1P52848 882 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 MRPL28Q13084 256 aaKnown RBP3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 DDX39BQ13838 428 aaKnown RBP3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 LRIT3Q3SXY7 679 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 RFTN2Q52LD8 501 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 ASPHD2Q6ICH7 369 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 PMF1Q6P1K2 205 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 SLC39A4Q6P5W5 647 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 BLOC1S2Q6QNY1 142 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 Q6ZRG5 221 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 C9orf47Q6ZRZ4 202 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 Q6ZVQ6 151 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 TAS2R42Q7RTR8 314 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 C16orf82Q7Z2V1 217 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 ZDHHC17Q8IUH5 632 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 SPATA2LQ8IUW3 424 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 CCDC36Q8IYA8 594 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 LINC00518Q8N0U6 118 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 TRIM58Q8NG06 486 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 OR5T2Q8NGG2 359 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 OR56B2PQ8NGI1 322 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 FCAMRQ8WWV6 532 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 CD101Q93033 1021 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 GIMAP5Q96F15 307 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 SENP5Q96HI0 755 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 HPDLQ96IR7 371 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 COG3Q96JB2 828 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 C4orf36Q96KX1 117 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 ACCSQ96QU6 501 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 TBCDQ9BTW9 1192 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 PAPOLGQ9BWT3 736 aaKnown RBP3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 C1QTNF4Q9BXJ3 329 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 NLNQ9BYT8 704 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 LRRCC1Q9C099 1032 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 DDX31Q9H8H2 851 aaKnown RBP3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 LPAR2Q9HBW0 351 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 GDAP2Q9NXN4 497 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 RABL2AQ9UBK7 228 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 CHRNA9Q9UGM1 479 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 B9D1Q9UPM9 204 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 PPP2R2CQ9Y2T4 447 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 OR10H1Q9Y4A9 318 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 LRP12Q9Y561 859 aa3.41□□□□□ -1.86
TRAPPC13-208ENST00000505553 PARD3Q8TEW0 1356 aa3.4□□□□□ -1.86
TRAPPC13-208ENST00000505553 ARID2Q68CP9 1835 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 SH3PXD2BA1X283 911 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 SHISA7A6NL88 538 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 MEI4A8MW99 385 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 LMO7DNF2Z398 122 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 SGK1O00141 431 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 CLDN5O00501 218 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 SH2D1BO14796 132 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 GPRIN2O60269 458 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 JAK2O60674 1132 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 STK17BO94768 372 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 ADCY5O95622 1261 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 MBD3O95983 291 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 UMODP07911 640 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 SLC35G4P0C7Q5 338 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 FAM157CP0CG43 387 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 SFTPCP11686 197 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 UQCRBP14927 111 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 GDI1P31150 447 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 DCTP40126 519 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 CDKN2AP42771 156 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 BACE1P56817 501 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 ABCE1P61221 599 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 UBE2HP62256 183 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 CBX1P83916 185 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 EXOSC2Q13868 293 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 KLF5Q13887 457 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 P2RY14Q15391 338 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 WDR38Q5JTN6 314 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 SPANXN4Q5MJ08 99 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZNF790Q6PG37 636 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms