RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ZNF267Q14586 743 aaPredicted RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 SF3B4Q15427 424 aaKnown RBP eCLIP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 TSNQ15631 228 aaKnown RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 SPANXN3Q5MJ09 141 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 HP1BP3Q5SSJ5 553 aaPredicted RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 VASNQ6EMK4 673 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 FAM45BPQ6NSW5 357 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 TTC27Q6P3X3 843 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 RNF111Q6ZNA4 994 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 DGAT2L6Q6ZPD8 337 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 CAPN12Q6ZSI9 719 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 SYDE1Q6ZW31 735 aaPredicted RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 YRDCQ86U90 279 aaKnown RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 TMEM139Q8IV31 216 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 PRR22Q8IZ63 422 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 LRRC75A-AS1Q8N1F1 130 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 ZNF441Q8N8Z8 693 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 ACOT4Q8N9L9 421 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 MCUQ8NE86 351 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 RDH11Q8TC12 318 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 FAM45AQ8TCE6 357 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 SLC44A1Q8WWI5 657 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 ISL2Q96A47 359 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 MAGOHBQ96A72 148 aaKnown RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 ESAMQ96AP7 390 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 ANKRD9Q96BM1 317 aaPredicted RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 INTS12Q96CB8 462 aaKnown RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 PIK3IP1Q96FE7 263 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 CERS2Q96G23 380 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 CFAP36Q96G28 342 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 ZC3HAV1LQ96H79 300 aaKnown RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 WDYHV1Q96HA8 205 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 ART5Q96L15 291 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 RILPQ96NA2 401 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 GNRHR2Q96P88 292 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 KCNC2Q96PR1 638 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 KRT12Q99456 494 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 PIGQQ9BRB3 760 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 SORBS1Q9BX66 1292 aaKnown RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 WWTR1Q9GZV5 400 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 LYRM4Q9HD34 91 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 PRDM7Q9NQW5 492 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 TEX10Q9NXF1 929 aaPredicted RBP6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 NDRG3Q9UGV2 375 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 C15orf41Q9Y2V0 281 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 VWA7Q9Y334 891 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 OARD1Q9Y530 152 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 NINQ8N4C6 2090 aa6.3□□□□□ -1.4
NPIPB3-203ENST00000504841 HIVEP2P31629 2446 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 TP53I11O14683 189 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 SIAH2O43255 324 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 OR10H2O60403 315 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 TRIM3O75382 744 aaPredicted RBP6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 CNOT4O95628 575 aaKnown RBP6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 IL18BPO95998 194 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 TGFB1P01137 390 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 PCNAP12004 261 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 CD22P20273 847 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 TCEA1P23193 301 aaKnown RBP6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 ATP5A1P25705 553 aaKnown RBP6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 GCKP35557 465 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 SOX18P35713 384 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 SSR2P43308 183 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 SLCO1A2P46721 670 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 HSPA7P48741 367 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 HNMTP50135 292 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 NR1H2P55055 460 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 DDX39BQ13838 428 aaKnown RBP6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 DOC2AQ14183 400 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 EBPQ15125 230 aaKnown RBP6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 RPS6KA2Q15349 733 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 NNATQ16517 81 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 ACKR1Q16570 336 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 NTRK2Q16620 822 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 AP5B1Q2VPB7 878 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 ADPRMQ3LIE5 342 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 KBTBD12Q3ZCT8 623 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 TBCELQ5QJ74 424 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 TRMT10BQ6PF06 316 aaKnown RBP6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 ANGPTL8Q6UXH0 198 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 UBE3DQ7Z6J8 389 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 ADAMTSL2Q86TH1 951 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 PHC2Q8IXK0 858 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 DND1Q8IYX4 353 aaKnown RBP6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 SLC15A4Q8N697 577 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 NAT8LQ8N9F0 302 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 SPC24Q8NBT2 197 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 SPPL2AQ8TCT8 520 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 EXT2Q93063 718 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 ABTB1Q969K4 478 aaPredicted RBP6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 RHBDF1Q96CC6 855 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 RBM18Q96H35 190 aaKnown RBP6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 FBXL20Q96IG2 436 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 FAM111AQ96PZ2 611 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 PIP5K1AQ99755 562 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 TUBA1CQ9BQE3 449 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 TMEM79Q9BSE2 394 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 MED18Q9BUE0 208 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 SFXN3Q9BWM7 321 aa6.29□□□□□ -1.4
NPIPB3-203ENST00000504841 PHACTR1Q9C0D0 580 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms