RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 M0R3H8 397 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 CLEC3AO75596 197 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 CD36P16671 472 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 CXCR1P25024 350 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 MRPL28Q13084 256 aaKnown RBP13.38□□□□□ -0.27
TCOF1-207ENST00000504761 PIN1Q13526 163 aaPredicted RBP13.38□□□□□ -0.27
TCOF1-207ENST00000504761 NSDHLQ15738 373 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 SLC36A3Q495N2 470 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 COLEC12Q5KU26 742 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 TMPRSS11AQ6ZMR5 421 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 SLC6A18Q96N87 628 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 ACTL8Q9H568 366 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 IL20RAQ9UHF4 553 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 PRR23D1E9PI22 279 aaPredicted RBP13.38□□□□□ -0.27
TCOF1-207ENST00000504761 ZNF195O14628 629 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 PRR23D2P0DMB1 279 aaPredicted RBP13.38□□□□□ -0.27
TCOF1-207ENST00000504761 KIAA0895LQ68EN5 471 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 CYHR1Q6ZMK1 362 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 IL17RCQ8NAC3 791 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 RIT1Q92963 219 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 MR1Q95460 341 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 MRGPRX1Q96LB2 322 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 TAPBPLQ9BX59 468 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 TMEM121BQ9BXQ6 578 aaPredicted RBP13.38□□□□□ -0.27
TCOF1-207ENST00000504761 ZDHHC5Q9C0B5 715 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 SERGEFQ9UGK8 458 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 DCNP07585 359 aaKnown RBP13.38□□□□□ -0.27
TCOF1-207ENST00000504761 HOXC5Q00444 222 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 GPR18Q14330 331 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 TIGD6Q17RP2 521 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 SMU1Q2TAY7 513 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 SHQ1Q6PI26 577 aaKnown RBP13.38□□□□□ -0.27
TCOF1-207ENST00000504761 PLXDC1Q8IUK5 500 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 TMEM156Q8N614 296 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 PIP5K1AQ99755 562 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 TEX10Q9NXF1 929 aaPredicted RBP13.38□□□□□ -0.27
TCOF1-207ENST00000504761 KCMF1Q9P0J7 381 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 TBC1D29Q9UFV1 150 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 SUSD2Q9UGT4 822 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 MED31Q9Y3C7 131 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 PARP14Q460N5 1801 aa13.38□□□□□ -0.27
TCOF1-207ENST00000504761 KIR2DS5A0A0G2JLQ3 304 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 A0A0G2JNG1 304 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 KIR2DS3K7RE56 304 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 ZNF33BQ06732 778 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 GINS1Q14691 196 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 MYBPC3Q14896 1274 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 KIR2DS5Q14953 304 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 IKBIPQ70UQ0 350 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 PELI3Q8N2H9 469 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 POC5Q8NA72 575 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 ZNF527Q8NB42 609 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 OR56A3Q8NH54 315 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 CDADC1Q9BWV3 514 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 KLRF1Q9NZS2 232 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 ZNF624Q9P2J8 865 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-207ENST00000504761 NAALAD2Q9Y3Q0 740 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 SPIN1Q9Y657 262 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-207ENST00000504761 CSTAP01040 98 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 RPS6KA3P51812 740 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 GRM7Q14831 915 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 METRNLQ641Q3 311 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 TRIM46Q7Z4K8 759 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 MEX3DQ86XN8 651 aaKnown RBP13.37□□□□□ -0.27
TCOF1-207ENST00000504761 OR10H5Q8NGA6 315 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 RSPRY1Q96DX4 576 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 CD180Q99467 661 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 TTTY10Q9BZA0 68 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 ZBTB20Q9HC78 741 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-207ENST00000504761 RPL36Q9Y3U8 105 aaKnown RBP13.37□□□□□ -0.27
TCOF1-207ENST00000504761 NPIPA5A0A0B4J1W7 369 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 C2CD4DB7Z1M9 353 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 NPIPA7E9PJI5 369 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 HAT1O14929 419 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 HCRTR2O43614 444 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 HEXBP07686 556 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 NPIPA8P0DM63 369 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 AZGP1P25311 298 aaKnown RBP13.37□□□□□ -0.27
TCOF1-207ENST00000504761 BMP8BP34820 402 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 TRAM2Q15035 370 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 UGT8Q16880 541 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 Q6ZS52 159 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 BMP8AQ7Z5Y6 402 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 OR9A4Q8NGU2 314 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 BBS10Q8TAM1 723 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 COQ10AQ96MF6 247 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 LRIT1Q9P2V4 623 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 ENTPD2Q9Y5L3 495 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 RNASET2O00584 256 aaKnown RBP13.37□□□□□ -0.27
TCOF1-207ENST00000504761 AREL1O15033 823 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 SCO2O43819 266 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 DCTP40126 519 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 ROR2Q01974 943 aaKnown RBP13.37□□□□□ -0.27
TCOF1-207ENST00000504761 CRTC2Q53ET0 693 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-207ENST00000504761 FRRS1Q6ZNA5 592 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 MCATQ8IVS2 390 aaKnown RBP13.37□□□□□ -0.27
TCOF1-207ENST00000504761 SLC5A8Q8N695 610 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 ANKFN1Q8N957 763 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 OR2L3Q8NG85 312 aa13.37□□□□□ -0.27
TCOF1-207ENST00000504761 IPCEF1Q8WWN9 437 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms