RNA–Protein interactions for RNA: ENST00000504441.6

PAAF1-204, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5

Gene PAAF1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-204ENST00000504441 WWTR1Q9GZV5 400 aa12.9□□□□□ -0.34
PAAF1-204ENST00000504441 PRDM14Q9GZV8 571 aa12.9□□□□□ -0.34
PAAF1-204ENST00000504441 RPF2Q9H7B2 306 aaKnown RBP12.9□□□□□ -0.34
PAAF1-204ENST00000504441 PLAC1Q9HBJ0 212 aa12.9□□□□□ -0.34
PAAF1-204ENST00000504441 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.9□□□□□ -0.34
PAAF1-204ENST00000504441 GALNT8Q9NY28 637 aa12.9□□□□□ -0.34
PAAF1-204ENST00000504441 ASIC3Q9UHC3 531 aa12.9□□□□□ -0.34
PAAF1-204ENST00000504441 JMJD1CQ15652 2540 aa12.9□□□□□ -0.34
PAAF1-204ENST00000504441 MBD3L4A6NDZ8 208 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-204ENST00000504441 MBD3L3A6NE82 208 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-204ENST00000504441 MBD3L5A6NJ08 208 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-204ENST00000504441 INAFM1C9JVW0 142 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 CES2O00748 559 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 TP53I11O14683 189 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 OR10H2O60403 315 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 TMIGD3P0DMS9 266 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-204ENST00000504441 ALOX15P16050 662 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-204ENST00000504441 HIST1H1TP22492 207 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-204ENST00000504441 CDK9P50750 372 aaKnown RBP12.89□□□□□ -0.35
PAAF1-204ENST00000504441 IGLV3-21P80748 117 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-204ENST00000504441 PPP2R2BQ00005 443 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 IRF8Q02556 426 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 FOXF2Q12947 444 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 SLAMF1Q13291 335 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 RCAN2Q14206 197 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 TGFBIQ15582 683 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 PDK4Q16654 411 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 HIST2H2ACQ16777 129 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-204ENST00000504441 EIPR1Q53HC9 387 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 PAGE2BQ5JRK9 111 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 WIPI1Q5MNZ9 446 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-204ENST00000504441 C18orf63Q68DL7 685 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 HIST2H2AA3Q6FI13 130 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 PLXDC2Q6UX71 529 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 SYDE1Q6ZW31 735 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-204ENST00000504441 PACS2Q86VP3 889 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 C9orf106Q8NAJ2 232 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 MBD3L2Q8NHZ7 208 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-204ENST00000504441 GRK7Q8WTQ7 553 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 EFCAB11Q9BUY7 163 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 MS4A8Q9BY19 250 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 EHD1Q9H4M9 534 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 CNOT10Q9H9A5 744 aaKnown RBP12.89□□□□□ -0.35
PAAF1-204ENST00000504441 TEX10Q9NXF1 929 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-204ENST00000504441 JKAMPQ9P055 326 aa12.89□□□□□ -0.35
PAAF1-204ENST00000504441 EIF3LQ9Y262 564 aaKnown RBP12.89□□□□□ -0.35
PAAF1-204ENST00000504441 TRIM64A6NGJ6 449 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 TRIM64BA6NI03 449 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 CD8B2A6NJW9 211 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 WASHC1A8K0Z3 465 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 GOLGA6L6A8MZA4 724 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 CCNT2O60583 730 aaKnown RBP12.88□□□□□ -0.35
PAAF1-204ENST00000504441 GOSR1O95249 250 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 HPNP05981 417 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 SRYQ05066 204 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 CHIT1Q13231 466 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 RPS6KA2Q15349 733 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 NTRK2Q16620 822 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 CYP1B1Q16678 543 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 TBCELQ5QJ74 424 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 CXXC5Q7LFL8 322 aaKnown RBP12.88□□□□□ -0.35
PAAF1-204ENST00000504441 ZC3HC1Q86WB0 502 aaKnown RBP12.88□□□□□ -0.35
PAAF1-204ENST00000504441 TAGAPQ8N103 731 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 BBOF1Q8ND07 529 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 SLC44A1Q8WWI5 657 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 RIT1Q92963 219 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 EXT2Q93063 718 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 ABTB1Q969K4 478 aaPredicted RBP12.88□□□□□ -0.35
PAAF1-204ENST00000504441 PERPQ96FX8 193 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 WDYHV1Q96HA8 205 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 DACH2Q96NX9 599 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 OR51B5Q9H339 312 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 CD274Q9NZQ7 290 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 C6orf203Q9P0P8 240 aaPredicted RBP12.88□□□□□ -0.35
PAAF1-204ENST00000504441 C15orf41Q9Y2V0 281 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 NINQ8N4C6 2090 aa12.88□□□□□ -0.35
PAAF1-204ENST00000504441 C2orf92A0A1B0GVN3 265 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 ANKRD33BA6NCL7 494 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 GLOD5A6NK44 160 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 DNALI1O14645 258 aaPredicted RBP12.87□□□□□ -0.35
PAAF1-204ENST00000504441 GNB5O14775 395 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 STK16O75716 305 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 SNX4O95219 450 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 IL18BPO95998 194 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 FREM3P0C091 2139 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 CPOXP36551 454 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 SLCO1A2P46721 670 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 RAP1GDS1P52306 607 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 NAGLUP54802 743 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 SLC12A2P55011 1212 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 SLC37A1P57057 533 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 LAPTM5Q13571 262 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 DDX39BQ13838 428 aaKnown RBP12.87□□□□□ -0.35
PAAF1-204ENST00000504441 EBPQ15125 230 aaKnown RBP12.87□□□□□ -0.35
PAAF1-204ENST00000504441 TMEM35AQ53FP2 167 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 FNDC7Q5VTL7 733 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 HLA-DQA1Q5Y7H0 255 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 OR4C11Q6IEV9 310 aa12.87□□□□□ -0.35
PAAF1-204ENST00000504441 YTHDF3Q7Z739 585 aaKnown RBP12.87□□□□□ -0.35
PAAF1-204ENST00000504441 YRDCQ86U90 279 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms