RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 NPLQ9BXD5 320 aaPredicted RBP15.8■□□□□ 0.12
PCDHA1-203ENST00000504120 SMURF1Q9HCE7 757 aa15.8■□□□□ 0.12
PCDHA1-203ENST00000504120 ZFR2Q9UPR6 939 aaKnown RBP15.8■□□□□ 0.12
PCDHA1-203ENST00000504120 AXIN1O15169 862 aa15.8■□□□□ 0.12
PCDHA1-203ENST00000504120 C5AR1P21730 350 aa15.8■□□□□ 0.12
PCDHA1-203ENST00000504120 OXTRP30559 389 aa15.8■□□□□ 0.12
PCDHA1-203ENST00000504120 SPHARQ15513 63 aa15.8■□□□□ 0.12
PCDHA1-203ENST00000504120 CDKL4Q5MAI5 379 aa15.8■□□□□ 0.12
PCDHA1-203ENST00000504120 ADAMTS18Q8TE60 1221 aa15.8■□□□□ 0.12
PCDHA1-203ENST00000504120 LGALS12Q96DT0 336 aa15.8■□□□□ 0.12
PCDHA1-203ENST00000504120 MROQ9BYG7 248 aa15.8■□□□□ 0.12
PCDHA1-203ENST00000504120 MYH13Q9UKX3 1938 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 C13orf42A0A1B0GVH6 325 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 MYADML2A6NDP7 307 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 H3BSH0 61 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 FARS2O95363 451 aaKnown RBP15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 PABPC4LP0CB38 370 aaKnown RBP15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 NDUFV2P19404 249 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 CD70P32970 193 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 DUSP3P51452 185 aaPredicted RBP15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 TAS2R38P59533 333 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 CCSAPQ6IQ19 270 aaPredicted RBP15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 RNF111Q6ZNA4 994 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 MYH6P13533 1939 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 A0A1B0GVC2 190 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 FEZF1A0PJY2 475 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 SOCS2O14508 198 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 SOX2P48431 317 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 DEFA5Q01523 94 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 PLCXD2Q0VAA5 305 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 CST6Q15828 149 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 CTC1Q2NKJ3 1217 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 GRHL2Q6ISB3 625 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 ZNF283Q8N7M2 679 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 SGTBQ96EQ0 304 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 ZBED3Q96IU2 234 aaPredicted RBP15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 TTTY10Q9BZA0 68 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 LDAHQ9H6V9 325 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 ANHXE9PGG2 379 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 CDC123O75794 336 aaPredicted RBP15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 FGF4P08620 206 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 ACTA2P62736 377 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 ACTG2P63267 376 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 PIGFQ07326 219 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 GAS6Q14393 721 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 ARHGAP11AQ6P4F7 1023 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 ENPP6Q6UWR7 440 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 CEACAM19Q7Z692 300 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 CBARPQ8N350 705 aaPredicted RBP15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 ZSCAN4Q8NAM6 433 aaPredicted RBP15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 SNIP1Q8TAD8 396 aaKnown RBP15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 TMEM184CQ9NVA4 438 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 SMOXQ9NWM0 555 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 HPF1Q9NWY4 346 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 RNF186Q9NXI6 227 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 C11orf98E9PRG8 122 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 BMP2P12643 396 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 HERV-K104P61576 105 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 GATSQ8NAP1 163 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 KDM1BQ8NB78 822 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 ZNF296Q8WUU4 475 aaPredicted RBP15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 SORCS1Q8WY21 1168 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 AKAP1Q92667 903 aaKnown RBP eCLIP15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 WASF3Q9UPY6 502 aa15.79■□□□□ 0.12
PCDHA1-203ENST00000504120 ADAP00813 363 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 H2BFMP0C1H6 154 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 FBLP22087 321 aaKnown RBP15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 RPA4Q13156 261 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 LRIT3Q3SXY7 679 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 LRRN1Q6UXK5 716 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 TSPAN33Q86UF1 283 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 C16orf78Q8WTQ4 265 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 PRR11Q96HE9 360 aaPredicted RBP15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 BIRC8Q96P09 236 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 GPR34Q9UPC5 381 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 ST14Q9Y5Y6 855 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 IRS2Q9Y4H2 1338 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 NHSL1Q5SYE7 1610 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 LOC100509620A0A075B734 347 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 A0A0G2JPF8 293 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 HNRNPCL3B7ZW38 293 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 TGM5O43548 720 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 DHRS4L1P0CG22 281 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 HNRNPCL4P0DMR1 293 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 CYBAP13498 195 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 MYF6P23409 242 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 DPP6P42658 865 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 RAB28P51157 221 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 IST1P53990 364 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 GRK1Q15835 563 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 XKRXQ6PP77 449 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 B3GNT9Q6UX72 402 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 ASRGL1Q7L266 308 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 FOXRED2Q8IWF2 684 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 C12orf76Q8N812 135 aaPredicted RBP15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 TMIEQ8NEW7 156 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 BOCQ9BWV1 1114 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 FBRSQ9HAH7 460 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 PELI2Q9HAT8 420 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 GXYLT2A0PJZ3 443 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms