RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 DYDC1Q8WWB3 177 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 SENP5Q96HI0 755 aaPredicted RBP23.4■■□□□ 1.34
LSM6-202ENST00000502781 AKTIPQ9H8T0 292 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 CXorf21Q9HAI6 301 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 ASIC5Q9NY37 505 aa23.4■■□□□ 1.34
LSM6-202ENST00000502781 BSNQ9UPA5 3926 aa23.39■■□□□ 1.34
LSM6-202ENST00000502781 SMG1Q96Q15 3661 aaKnown RBP23.39■■□□□ 1.33
LSM6-202ENST00000502781 OR10H2O60403 315 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 MAPK1P28482 360 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 EMX2Q04743 252 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 DUSP2Q05923 314 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 PRSS53Q2L4Q9 553 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 HSP90B2PQ58FF3 399 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 RGS9BPQ6ZS82 235 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 WDR75Q8IWA0 830 aaKnown RBP23.39■■□□□ 1.33
LSM6-202ENST00000502781 SAMD14Q8IZD0 417 aaPredicted RBP23.39■■□□□ 1.33
LSM6-202ENST00000502781 LGI4Q8N135 537 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 ZNF321PQ8N8H1 164 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 FNDC5Q8NAU1 212 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 RIT1Q92963 219 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 FBXL20Q96IG2 436 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 TSSK3Q96PN8 268 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 OR8D2Q9GZM6 311 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 SLC35C2Q9NQQ7 365 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 MARCOQ9UEW3 520 aaPredicted RBP23.39■■□□□ 1.33
LSM6-202ENST00000502781 BAIAP2L1Q9UHR4 511 aa23.39■■□□□ 1.33
LSM6-202ENST00000502781 A8MUI8 341 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 TBX19O60806 448 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 VPS4BO75351 444 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 PRPS2P11908 318 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 FEN1P39748 380 aaKnown RBP23.38■■□□□ 1.33
LSM6-202ENST00000502781 MAD2L1Q13257 205 aaPredicted RBP23.38■■□□□ 1.33
LSM6-202ENST00000502781 ACER2Q5QJU3 275 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 LARP4Q71RC2 724 aaKnown RBP eCLIP23.38■■□□□ 1.334e-6■□□□□ 9.4
LSM6-202ENST00000502781 TICAM1Q8IUC6 712 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 SLC5A8Q8N695 610 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 OR8K3Q8NH51 312 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 CDC26Q8NHZ8 85 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 ART5Q96L15 291 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 PPP1R36Q96LQ0 422 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 ZNF354BQ96LW1 612 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 MAGEB18Q96M61 343 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 SLCO1B3Q9NPD5 702 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 TEKT2Q9UIF3 430 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 ZNF780BQ9Y6R6 833 aa23.38■■□□□ 1.33
LSM6-202ENST00000502781 BOD1L1Q8NFC6 3051 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 TRBV11-1A0A0K0K1C0 115 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 HRKO00198 91 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 SDHDO14521 159 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 ZNF195O14628 629 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 DYRK3O43781 588 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 SOX18P35713 384 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 ASMTP46597 345 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 PDE7AQ13946 482 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 IL23RQ5VWK5 629 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 FAM180BQ6P0A1 224 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 CRLF3Q8IUI8 442 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 GALNT12Q8IXK2 581 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 LRRC25Q8N386 305 aaPredicted RBP23.37■■□□□ 1.33
LSM6-202ENST00000502781 RBMXL3Q8N7X1 1067 aaKnown RBP23.37■■□□□ 1.33
LSM6-202ENST00000502781 TM9SF4Q92544 642 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 EXOSC8Q96B26 276 aaKnown RBP23.37■■□□□ 1.33
LSM6-202ENST00000502781 C1orf50Q9BV19 199 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 DEFB126Q9BYW3 111 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 RNF32Q9H0A6 362 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 EPS8L2Q9H6S3 715 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 MIEF1Q9NQG6 463 aa23.37■■□□□ 1.33
LSM6-202ENST00000502781 TNRC6AQ8NDV7 1962 aaKnown RBP23.36■■□□□ 1.33
LSM6-202ENST00000502781 TMEM200CA6NKL6 621 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 TRPC5OSA6NMA1 111 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 PRKNO60260 465 aaPredicted RBP23.36■■□□□ 1.33
LSM6-202ENST00000502781 MAN1A2O60476 641 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 DPM1O60762 260 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 C1QL1O75973 258 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 KITP10721 976 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 CD97P48960 835 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 MGAT2Q10469 447 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 FUT7Q11130 342 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 ZNF267Q14586 743 aaPredicted RBP23.36■■□□□ 1.33
LSM6-202ENST00000502781 PRICKLE4Q2TBC4 344 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 ABHD17BQ5VST6 288 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 FCRLBQ6BAA4 426 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 OGFOD2Q6N063 350 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 LINC00696Q6ZRV3 163 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 MAVSQ7Z434 540 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 RPS19BP1Q86WX3 136 aaKnown RBP23.36■■□□□ 1.33
LSM6-202ENST00000502781 LIX1Q8N485 282 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 SUN3Q8TAQ9 357 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 CTHRC1Q96CG8 243 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 MAELQ96JY0 434 aaKnown RBP23.36■■□□□ 1.33
LSM6-202ENST00000502781 REEP4Q9H6H4 257 aa23.36■■□□□ 1.33
LSM6-202ENST00000502781 MYO1GB0I1T2 1018 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 CLPSP04118 112 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 PRB1P04280 392 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 CT62P0C5K7 136 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 S1PR1P21453 382 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 MLF1P58340 268 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 ERVK-8P63133 956 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 MAP4K2Q12851 820 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 MEP1AQ16819 746 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms