RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 CDK5R2Q13319 367 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 KYAT1Q16773 422 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 LIPKQ5VXJ0 399 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 RABEPKQ7Z6M1 372 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 OTUB2Q96DC9 234 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 PYURFQ96I23 114 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 ZMIZ1Q9ULJ6 1067 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 ATP5A1P25705 553 aaKnown RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 CD34P28906 385 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 CCND3P30281 292 aaPredicted RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 TBCEQ15813 527 aaPredicted RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 OR6F1Q8NGZ6 308 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 ZNF607Q96SK3 696 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 STRA6Q9BX79 667 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 KAT7O95251 611 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 HIST1H2ABP04908 130 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 ACAA1P09110 424 aaPredicted RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 COX7A2P14406 83 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 DDTP30046 118 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 ZNF136P52737 540 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 ART1P52961 327 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 FAM69AQ5T7M9 428 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 DPY19L2P1Q6NXN4 242 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 VHLLQ6RSH7 139 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 HIST3H2AQ7L7L0 130 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 CD101Q93033 1021 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 HIST1H2ACQ93077 130 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 NEUROD4Q9HD90 331 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 A0A0B4J2A0 478 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 BUD23O43709 281 aaKnown RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 CALCBP10092 127 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 ARSBP15848 533 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 TGM1P22735 817 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 GHRHRQ02643 423 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 LRRC38Q5VT99 294 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 GPRIN3Q6ZVF9 776 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 FAM26EQ8N5C1 309 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 ALG3Q92685 438 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 NGLY1Q96IV0 654 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 RPL10LQ96L21 214 aaKnown RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 AP5M1Q9H0R1 490 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 SHPKQ9UHJ6 478 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 A3GALT2U3KPV4 340 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 GXYLT2A0PJZ3 443 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 PDYNP01213 254 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 ACVR2AP27037 513 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 RXRBP28702 533 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 CD300CQ08708 224 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 TTC32Q5I0X7 151 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 DCST1Q5T197 706 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 CD276Q5ZPR3 534 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 EFCAB12Q6NXP0 572 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 RAB24Q969Q5 203 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 ZNF668Q96K58 619 aaPredicted RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 ZNF582Q96NG8 517 aaPredicted RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 CITED2Q99967 270 aaPredicted RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 CHRDQ9H2X0 955 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 SOX17Q9H6I2 414 aaPredicted RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 CARMIL2Q6F5E8 1435 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 ZMYM4Q5VZL5 1548 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 PRAMEF22A3QJZ6 481 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 NFYBP25208 207 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 S100A11P31949 105 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 BMPR1AP36894 532 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 CASP9P55211 416 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 C11orf42Q8N5U0 333 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.59□□□□□ -1.672e-9■□□□□ 10.7
NEAT1-202ENST00000501122 MBD3L1Q8WWY6 194 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 SPON2Q9BUD6 331 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 ELF5Q9UKW6 265 aaPredicted RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 USP18Q9UMW8 372 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 SCAF11Q99590 1463 aaKnown RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 TREHO43280 583 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 RAB36O95755 333 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 HPRP00739 348 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 GALNSP34059 522 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 SCARB2Q14108 478 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 DHRS4L2Q6PKH6 230 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 SLC47A2Q86VL8 602 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 SERPINA9Q86WD7 417 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 LRR1Q96L50 414 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 SRRQ9GZT4 340 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 ZDHHC18Q9NUE0 388 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 SLC22A20A6NK97 555 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 PPM1DO15297 605 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 ZNF630Q2M218 657 aaPredicted RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 TMEM205Q6UW68 189 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 UBTD2Q8WUN7 234 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 MXRA8Q9BRK3 442 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 GATA5Q9BWX5 397 aaPredicted RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 NUP160Q12769 1436 aa4.59□□□□□ -1.67
NEAT1-202ENST00000501122 YTHDC2Q9H6S0 1430 aaKnown RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 USP42Q9H9J4 1324 aaKnown RBP4.59□□□□□ -1.67
NEAT1-202ENST00000501122 SLC16A4O15374 487 aa4.59□□□□□ -1.68
NEAT1-202ENST00000501122 CCKARP32238 428 aa4.59□□□□□ -1.68
NEAT1-202ENST00000501122 ZNF91Q05481 1191 aa4.59□□□□□ -1.68
NEAT1-202ENST00000501122 NKAIN1Q4KMZ8 207 aa4.59□□□□□ -1.68
NEAT1-202ENST00000501122 ZNF619Q8N2I2 560 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms