RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 CACNA1GO43497 2377 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 DYTNA2CJ06 578 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 MAN1A2O60476 641 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 SNNO75324 88 aaPredicted RBP15.61■□□□□ 0.09
PRKCB-210ENST00000498739 JUNP05412 331 aaKnown RBP15.61■□□□□ 0.09
PRKCB-210ENST00000498739 NT5EP21589 574 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 ERVK-8P63133 956 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 PPP2R2AP63151 447 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 ZNF267Q14586 743 aaPredicted RBP15.61■□□□□ 0.09
PRKCB-210ENST00000498739 SPRED3Q2MJR0 410 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 ATP6AP1LQ52LC2 224 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 C6orf163Q5TEZ5 329 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 SLC6A19Q695T7 634 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 RPS19BP1Q86WX3 136 aaKnown RBP15.61■□□□□ 0.09
PRKCB-210ENST00000498739 BEST3Q8N1M1 668 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 ZNF721Q8TF20 911 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 THAP3Q8WTV1 239 aaPredicted RBP15.61■□□□□ 0.09
PRKCB-210ENST00000498739 TUBGCP3Q96CW5 907 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 SENP5Q96HI0 755 aaPredicted RBP15.61■□□□□ 0.09
PRKCB-210ENST00000498739 FCRL1Q96LA6 429 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 MIEF1Q9NQG6 463 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 PNPOQ9NVS9 261 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 LUZP4Q9P127 313 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 ERVK-19Q9WJR5 959 aa15.61■□□□□ 0.09
PRKCB-210ENST00000498739 FAM208BQ5VWN6 2430 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 HRKO00198 91 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 PRKNO60260 465 aaPredicted RBP15.6■□□□□ 0.09
PRKCB-210ENST00000498739 ZFAND5O76080 213 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 WDPCPO95876 746 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 SDC1P18827 310 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 CSNK2A2P19784 350 aaPredicted RBP15.6■□□□□ 0.09
PRKCB-210ENST00000498739 DDCP20711 480 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 TACR1P25103 407 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 MAPK1P28482 360 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 GALNSP34059 522 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 ST13P50502 369 aaKnown RBP15.6■□□□□ 0.09
PRKCB-210ENST00000498739 C6orf136Q5SQH8 315 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 FAM71E1Q6IPT2 247 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 HSDL2Q6YN16 418 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 IKBIPQ70UQ0 350 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 PRICKLE2Q7Z3G6 844 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 TICAM1Q8IUC6 712 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 GALNT12Q8IXK2 581 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 LRRC25Q8N386 305 aaPredicted RBP15.6■□□□□ 0.09
PRKCB-210ENST00000498739 FNDC5Q8NAU1 212 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 CLHC1Q8NHS4 586 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.6■□□□□ 0.096e-6■■■□□ 15.1
PRKCB-210ENST00000498739 DYDC1Q8WWB3 177 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 ZNF75CPQ92670 426 aaPredicted RBP15.6■□□□□ 0.09
PRKCB-210ENST00000498739 GFM2Q969S9 779 aaKnown RBP15.6■□□□□ 0.09
PRKCB-210ENST00000498739 CNRIP1Q96F85 164 aaPredicted RBP15.6■□□□□ 0.09
PRKCB-210ENST00000498739 FBXL20Q96IG2 436 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 EGLN2Q96KS0 407 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 TSSK3Q96PN8 268 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 GIMAP4Q9NUV9 329 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 EHD3Q9NZN3 535 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 ENTPD4Q9Y227 616 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 B3GNT3Q9Y2A9 372 aa15.6■□□□□ 0.09
PRKCB-210ENST00000498739 WBP11Q9Y2W2 641 aaKnown RBP15.6■□□□□ 0.09
PRKCB-210ENST00000498739 OR5H15A6NDH6 313 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 GABRR3A8MPY1 467 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 SUV39H1O43463 412 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 KITP10721 976 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 PTGER1P34995 402 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 HK2P52789 917 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 DUSP2Q05923 314 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 Q6ZS92 163 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 LGI4Q8N135 537 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 CATSPER1Q8NEC5 780 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 HAS2Q92819 552 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 PNPLA2Q96AD5 504 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 ZNF681Q96N22 645 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 C1orf50Q9BV19 199 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 NUF2Q9BZD4 464 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 BRINP2Q9C0B6 783 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 RNF32Q9H0A6 362 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.59■□□□□ 0.095e-7■■■■■ 29.2
PRKCB-210ENST00000498739 LIN28AQ9H9Z2 209 aaKnown RBP15.59■□□□□ 0.09
PRKCB-210ENST00000498739 CXorf21Q9HAI6 301 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 SLAMF7Q9NQ25 335 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 ANKRD10Q9NXR5 420 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 MARCOQ9UEW3 520 aaPredicted RBP15.59■□□□□ 0.09
PRKCB-210ENST00000498739 BAIAP2L1Q9UHR4 511 aa15.59■□□□□ 0.09
PRKCB-210ENST00000498739 FCHO1O14526 889 aa15.58■□□□□ 0.08
PRKCB-210ENST00000498739 KLF11O14901 512 aa15.58■□□□□ 0.08
PRKCB-210ENST00000498739 LRATO95237 230 aa15.58■□□□□ 0.08
PRKCB-210ENST00000498739 IGKV3-11P04433 115 aa15.58■□□□□ 0.08
PRKCB-210ENST00000498739 ATP1B1P05026 303 aa15.58■□□□□ 0.08
PRKCB-210ENST00000498739 CT62P0C5K7 136 aa15.58■□□□□ 0.08
PRKCB-210ENST00000498739 BCKDHAP12694 445 aa15.58■□□□□ 0.08
PRKCB-210ENST00000498739 MLF1P58340 268 aa15.58■□□□□ 0.08
PRKCB-210ENST00000498739 RNF4P78317 190 aa15.58■□□□□ 0.08
PRKCB-210ENST00000498739 OCRLQ01968 901 aa15.58■□□□□ 0.08
PRKCB-210ENST00000498739 PLEKHN1Q494U1 663 aaPredicted RBP15.58■□□□□ 0.08
PRKCB-210ENST00000498739 RNF111Q6ZNA4 994 aa15.58■□□□□ 0.08
PRKCB-210ENST00000498739 CCDC116Q8IYX3 515 aa15.58■□□□□ 0.08
PRKCB-210ENST00000498739 SAMD14Q8IZD0 417 aaPredicted RBP15.58■□□□□ 0.08
PRKCB-210ENST00000498739 LIX1Q8N485 282 aa15.58■□□□□ 0.08
PRKCB-210ENST00000498739 LRRC8CQ8TDW0 803 aa15.58■□□□□ 0.08
PRKCB-210ENST00000498739 UTP23Q9BRU9 249 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms