RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 LINGO1Q96FE5 620 aa5.12□□□□□ -1.59
SPTA1-209ENST00000498708 DHRS1Q96LJ7 313 aa5.12□□□□□ -1.59
SPTA1-209ENST00000498708 TSNARE1Q96NA8 513 aa5.12□□□□□ -1.59
SPTA1-209ENST00000498708 AARSD1Q9BTE6 412 aaKnown RBP5.12□□□□□ -1.59
SPTA1-209ENST00000498708 TP63Q9H3D4 680 aaPredicted RBP5.12□□□□□ -1.59
SPTA1-209ENST00000498708 KLHL31Q9H511 634 aa5.12□□□□□ -1.59
SPTA1-209ENST00000498708 CNTD2Q9H8S5 307 aa5.12□□□□□ -1.59
SPTA1-209ENST00000498708 LZTFL1Q9NQ48 299 aa5.12□□□□□ -1.59
SPTA1-209ENST00000498708 PNO1Q9NRX1 252 aaKnown RBP5.12□□□□□ -1.59
SPTA1-209ENST00000498708 INTS10Q9NVR2 710 aaKnown RBP5.12□□□□□ -1.59
SPTA1-209ENST00000498708 ALKBH4Q9NXW9 302 aa5.12□□□□□ -1.59
SPTA1-209ENST00000498708 SLC17A6Q9P2U8 582 aa5.12□□□□□ -1.59
SPTA1-209ENST00000498708 Q9UFV3 132 aa5.12□□□□□ -1.59
SPTA1-209ENST00000498708 TRMT6Q9UJA5 497 aaKnown RBP5.12□□□□□ -1.59
SPTA1-209ENST00000498708 DSCAMO60469 2012 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 HEATR5AQ86XA9 2040 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 KCNE1BA0A087WTH5 132 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 ZCWPW2A0A1B0GU75 182 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 PINLYPA6NC86 204 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 PABPN1LA6NDY0 278 aaKnown RBP5.11□□□□□ -1.59
SPTA1-209ENST00000498708 SERINC4A6NH21 518 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 SAGE2PA6NJ88 616 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 SDR42E2A6NKP2 422 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 C4orf51C9J302 202 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 KLRC4-KLRK1H3BQV0 150 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 PSMD12O00232 456 aaPredicted RBP5.11□□□□□ -1.59
SPTA1-209ENST00000498708 FCHO1O14526 889 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 PRKNO60260 465 aaPredicted RBP5.11□□□□□ -1.59
SPTA1-209ENST00000498708 BANF1O75531 89 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 ITGA10O75578 1167 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 TPPPO94811 219 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 MYO1DO94832 1006 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 HRGP04196 525 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 HIST1H2AGP0C0S8 130 aaPredicted RBP5.11□□□□□ -1.59
SPTA1-209ENST00000498708 CCDC175P0C221 793 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 GLI4P10075 376 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 ENO3P13929 434 aaPredicted RBP5.11□□□□□ -1.59
SPTA1-209ENST00000498708 NPPBP16860 134 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 EGR1P18146 543 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 HIST1H2ADP20671 130 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 SAT1P21673 171 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 JAK1P23458 1154 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 HRH2P25021 359 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 PPP2R1BP30154 601 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 SKIV2L2P42285 1042 aaKnown RBP5.11□□□□□ -1.59
SPTA1-209ENST00000498708 HLCSP50747 726 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 CCR8P51685 355 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 ADARP55265 1226 aaKnown RBP5.11□□□□□ -1.59
SPTA1-209ENST00000498708 RELAQ04206 551 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 HERC3Q15034 1050 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 ZNF750Q32MQ0 723 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 CHRFAM7AQ494W8 412 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 CMPK2Q5EBM0 449 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 TOR1AIP1Q5JTV8 583 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 ZNF585AQ6P3V2 769 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 TTC27Q6P3X3 843 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 LCTLQ6UWM7 567 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 IL20RBQ6UXL0 311 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 C4orf22Q6V702 233 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 WDR53Q7Z5U6 358 aaPredicted RBP5.11□□□□□ -1.59
SPTA1-209ENST00000498708 CCDC91Q7Z6B0 441 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 CLNKQ7Z7G1 428 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 CYP4Z2PQ8N1L4 340 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 CA13Q8N1Q1 262 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 NFAM1Q8NET5 270 aaPredicted RBP5.11□□□□□ -1.59
SPTA1-209ENST00000498708 OR5M3Q8NGP4 307 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 LINC01560Q8TB33 94 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 UTP15Q8TED0 518 aaKnown RBP5.11□□□□□ -1.59
SPTA1-209ENST00000498708 MZB1Q8WU39 189 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 C17orf50Q8WW18 174 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 ROBO4Q8WZ75 1007 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 CCT6BQ92526 530 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 KCNJ9Q92806 393 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 SLCO2A1Q92959 643 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 NCLNQ969V3 563 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 SNF8Q96H20 258 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 LCORQ96JN0 433 aaPredicted RBP5.11□□□□□ -1.59
SPTA1-209ENST00000498708 PDLIM2Q96JY6 352 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 HIST1H2AHQ96KK5 128 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 SERPINB12Q96P63 405 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 OR1F2PQ96R84 312 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 OLFM1Q99784 485 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 HIST1H2AJQ99878 128 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 H2AFJQ9BTM1 129 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 CDADC1Q9BWV3 514 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 IQCGQ9H095 443 aaKnown RBP5.11□□□□□ -1.59
SPTA1-209ENST00000498708 LRTM1Q9HBL6 345 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 YAE1D1Q9NRH1 226 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 PNPLA3Q9NST1 481 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 KCMF1Q9P0J7 381 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 FBXO5Q9UKT4 447 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 ERVK-11Q9UQG0 969 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 GPR55Q9Y2T6 319 aaPredicted RBP5.11□□□□□ -1.59
SPTA1-209ENST00000498708 KLF13Q9Y2Y9 288 aaPredicted RBP5.11□□□□□ -1.59
SPTA1-209ENST00000498708 LIPGQ9Y5X9 500 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 SLC22A7Q9Y694 548 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 ARHGAP21Q5T5U3 1957 aa5.11□□□□□ -1.59
SPTA1-209ENST00000498708 TCRBV16S1A1N1A0A5B0 115 aa5.1□□□□□ -1.59
SPTA1-209ENST00000498708 CLCA1A8K7I4 914 aa5.1□□□□□ -1.59
SPTA1-209ENST00000498708 GOLGA6L6A8MZA4 724 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms