RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 PAPD4Q6PIY7 484 aaKnown RBP12.7□□□□□ -0.38
CPNE1-227ENST00000498056 SZRD1Q7Z422 152 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 PPP1R32Q7Z5V6 425 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 CAMKMTQ7Z624 323 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 MRGPREQ86SM8 312 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 SPACA3Q8IXA5 215 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 GALNT12Q8IXK2 581 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 ST13P4Q8IZP2 240 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-227ENST00000498056 CPSF7Q8N684 471 aaKnown RBP12.7□□□□□ -0.38
CPNE1-227ENST00000498056 OR9A2Q8NGT5 310 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 DOK4Q8TEW6 326 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 VPS33AQ96AX1 596 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 PPWD1Q96BP3 646 aaKnown RBP12.7□□□□□ -0.38
CPNE1-227ENST00000498056 SPDL1Q96EA4 605 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 CNPPD1Q9BV87 410 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 DPH1Q9BZG8 443 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 FAM117AQ9C073 453 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 RAXQ9Y2V3 346 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 CLDN16Q9Y5I7 305 aa12.7□□□□□ -0.38
CPNE1-227ENST00000498056 MED13Q9UHV7 2174 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 A0A1W2PRB8 838 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 SAGE2PA6NJ88 616 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 ZNF891A8MT65 544 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-227ENST00000498056 MYO1GB0I1T2 1018 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 C17orf105B2RV13 164 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 SOCS6O14544 535 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 DYRK3O43781 588 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 C6orf47O95873 294 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 IL6P05231 212 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 PGRP06401 933 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 COX6A1P12074 109 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 WT1P19544 449 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-227ENST00000498056 CAPN3P20807 821 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 EIF2S3P41091 472 aaKnown RBP12.69□□□□□ -0.38
CPNE1-227ENST00000498056 ZFP36L2P47974 494 aaKnown RBP12.69□□□□□ -0.38
CPNE1-227ENST00000498056 ATP1A4Q13733 1029 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 SSPNQ14714 243 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 MAPRE2Q15555 327 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 ELAVL1Q15717 326 aaKnown RBP12.69□□□□□ -0.38
CPNE1-227ENST00000498056 BROXQ5VW32 411 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 TMEM205Q6UW68 189 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 LRRC69Q6ZNQ3 347 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 ZNF551Q7Z340 670 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-227ENST00000498056 CPEB2Q7Z5Q1 589 aaKnown RBP12.69□□□□□ -0.38
CPNE1-227ENST00000498056 SNX32Q86XE0 403 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 CCDC116Q8IYX3 515 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 CLECL1Q8IZS7 167 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 ADCY4Q8NFM4 1077 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 OR4A15Q8NGL6 344 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 SUN3Q8TAQ9 357 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 COQ8BQ96D53 544 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 ZNF681Q96N22 645 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 AMDHD1Q96NU7 426 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 LRRC37BQ96QE4 947 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 OR52E6Q96RD3 313 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 CCNL2Q96S94 520 aaPredicted RBP12.69□□□□□ -0.38
CPNE1-227ENST00000498056 GLIPR2Q9H4G4 154 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 FAM120CQ9NX05 1096 aaKnown RBP12.69□□□□□ -0.38
CPNE1-227ENST00000498056 FBXL4Q9UKA2 621 aa12.69□□□□□ -0.38
CPNE1-227ENST00000498056 URB1O60287 2271 aaKnown RBP12.68□□□□□ -0.38
CPNE1-227ENST00000498056 IGHV1-45A0A0A0MS14 117 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 NSG1A0A0A6YYJ2 146 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 PEX12O00623 359 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 PCDH17O14917 1159 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 ANGPT2O15123 496 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 ATP1B1P05026 303 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 SLC35E2P0CK97 266 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 CD1EP15812 388 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 MPIP34949 423 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 MC3RP41968 323 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 CDK9P50750 372 aaKnown RBP12.68□□□□□ -0.38
CPNE1-227ENST00000498056 MANFP55145 182 aaKnown RBP12.68□□□□□ -0.38
CPNE1-227ENST00000498056 MRPS35P82673 323 aaKnown RBP12.68□□□□□ -0.38
CPNE1-227ENST00000498056 CDC20Q12834 499 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 PCOLCEQ15113 449 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 CEBPEQ15744 281 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 C6orf10Q5SRN2 563 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 ANXA8L1Q5VT79 327 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 BLOC1S3Q6QNY0 202 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 TMEM107Q6UX40 140 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 DGAT2L6Q6ZPD8 337 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 FUNDC1Q8IVP5 155 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 VWA5B2Q8N398 1253 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 NATD1Q8N6N6 113 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 POU5F2Q8N7G0 328 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 OR11G2Q8NGC1 345 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 OR8J2Q8NGG1 315 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 OR14A16Q8NHC5 309 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 KAT2AQ92830 837 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 RIT1Q92963 219 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 RBM18Q96H35 190 aaKnown RBP12.68□□□□□ -0.38
CPNE1-227ENST00000498056 VPS50Q96JG6 964 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 LPAR4Q99677 370 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 OR8D2Q9GZM6 311 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 MYLK2Q9H1R3 596 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 RMND5AQ9H871 391 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 ZNF160Q9HCG1 818 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 NEUROD4Q9HD90 331 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 P4HTMQ9NXG6 502 aa12.68□□□□□ -0.38
CPNE1-227ENST00000498056 TAS2R7Q9NYW3 318 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms