RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 KCNE4Q8WWG9 221 aa18.48■□□□□ 0.55
SCAMP3-209ENST00000497470 EXOSC8Q96B26 276 aaKnown RBP18.48■□□□□ 0.55
SCAMP3-209ENST00000497470 DGAT2Q96PD7 388 aa18.48■□□□□ 0.55
SCAMP3-209ENST00000497470 OR52E6Q96RD3 313 aa18.48■□□□□ 0.55
SCAMP3-209ENST00000497470 ZNF700Q9H0M5 742 aa18.48■□□□□ 0.55
SCAMP3-209ENST00000497470 SOX17Q9H6I2 414 aaPredicted RBP18.48■□□□□ 0.55
SCAMP3-209ENST00000497470 CXorf21Q9HAI6 301 aa18.48■□□□□ 0.55
SCAMP3-209ENST00000497470 PTGFRNQ9P2B2 879 aa18.48■□□□□ 0.55
SCAMP3-209ENST00000497470 PCDHGB4Q9UN71 923 aa18.48■□□□□ 0.55
SCAMP3-209ENST00000497470 G3BP2Q9UN86 482 aaKnown RBP18.48■□□□□ 0.55
SCAMP3-209ENST00000497470 TGFBR3LH3BV60 316 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 PRKRAO75569 313 aaKnown RBP18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 ICAM2P13598 275 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 MAOAP21397 527 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 F8A1P23610 371 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 MNAT1P51948 309 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 MANFP55145 182 aaKnown RBP18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 TXNL4AP83876 142 aaKnown RBP18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 GABPB1Q06547 395 aaPredicted RBP18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 CYLC2Q14093 348 aaPredicted RBP18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 TLR1Q15399 786 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 MAPKAPK3Q16644 382 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 MFSD4BQ5TF39 518 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 TRPM8Q7Z2W7 1104 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 THAP4Q8WY91 577 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 UCN3Q969E3 161 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 ITCHQ96J02 903 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 GLIPR2Q9H4G4 154 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 TAS2R9Q9NYW1 312 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 ZNF639Q9UID6 485 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 LEF1Q9UJU2 399 aaPredicted RBP18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 HS3ST3B1Q9Y662 390 aa18.47■□□□□ 0.55
SCAMP3-209ENST00000497470 TTC36A6NLP5 189 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 OR10H2O60403 315 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 ERN1O75460 977 aaKnown RBP18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 CDC123O75794 336 aaPredicted RBP18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 EFNA3P52797 238 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 OR4D2P58180 307 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 FOXK2Q01167 660 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 FUT7Q11130 342 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 UBAP2LQ14157 1087 aaKnown RBP18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 PRSS53Q2L4Q9 553 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 PRICKLE4Q2TBC4 344 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 PGS1Q32NB8 556 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 LRIF1Q5T3J3 769 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 OR4F3Q6IEY1 312 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 BHLHB9Q6PI77 547 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 FITM2Q8N6M3 262 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 OR7G1Q8NGA0 311 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 FBXL20Q96IG2 436 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 LPAR4Q99677 370 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 RBCK1Q9BYM8 510 aa18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.46■□□□□ 0.55
SCAMP3-209ENST00000497470 WASHC1A8K0Z3 465 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 TLX3O43711 291 aaPredicted RBP18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 LIFP15018 202 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 CAPN3P20807 821 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 EIF2S3P41091 472 aaKnown RBP18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 NCBP2P52298 156 aaKnown RBP eCLIP18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 SF3A3Q12874 501 aaKnown RBP eCLIP18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 EXT1Q16394 746 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 C6orf163Q5TEZ5 329 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 NDUFAF7Q7L592 441 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 TMEM151BQ8IW70 566 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 GALNT12Q8IXK2 581 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 CCDC116Q8IYX3 515 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 SHISA5Q8N114 240 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 TRIML2Q8N7C3 387 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 PCYOX1LQ8NBM8 494 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 OR8K3Q8NH51 312 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 SFXN5Q8TD22 340 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 PTPMT1Q8WUK0 201 aaPredicted RBP18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 GTF2H4Q92759 462 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 RIT1Q92963 219 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 TSLPQ969D9 159 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 CCNL2Q96S94 520 aaPredicted RBP18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 SEMA4CQ9C0C4 833 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 SLAMF7Q9NQ25 335 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 SERHLQ9NQF3 203 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 C5AR2Q9P296 337 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 CFL2Q9Y281 166 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 CLCA3PQ9Y6N3 262 aa18.45■□□□□ 0.54
SCAMP3-209ENST00000497470 CROCCQ5TZA2 2017 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 IGHV1-45A0A0A0MS14 117 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 SAGE2PA6NJ88 616 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 OR6C76A6NM76 312 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 ZNF891A8MT65 544 aaPredicted RBP18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 CDK2AP1O14519 115 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 SOCS6O14544 535 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 ANGPT2O15123 496 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 RRP8O43159 456 aaKnown RBP18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 HPP00738 406 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 COX4I1P13073 169 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 FEN1P39748 380 aaKnown RBP18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 GPR143P51810 404 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 DGKQP52824 942 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 UCNP55089 124 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 NME5P56597 212 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 PSPHP78330 225 aa18.44■□□□□ 0.54
SCAMP3-209ENST00000497470 MGAT2Q10469 447 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms