RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 ST13P4Q8IZP2 240 aaPredicted RBP16.09■□□□□ 0.17
TMEM53-209ENST00000495630 TAGAPQ8N103 731 aa16.09■□□□□ 0.17
TMEM53-209ENST00000495630 CMTM7Q96FZ5 175 aa16.09■□□□□ 0.17
TMEM53-209ENST00000495630 ZNF597Q96LX8 424 aa16.09■□□□□ 0.17
TMEM53-209ENST00000495630 PELOQ9BRX2 385 aaKnown RBP16.09■□□□□ 0.17
TMEM53-209ENST00000495630 WDR83Q9BRX9 315 aaKnown RBP16.09■□□□□ 0.17
TMEM53-209ENST00000495630 YIPF4Q9BSR8 244 aa16.09■□□□□ 0.17
TMEM53-209ENST00000495630 WWTR1Q9GZV5 400 aa16.09■□□□□ 0.17
TMEM53-209ENST00000495630 RHOJQ9H4E5 214 aa16.09■□□□□ 0.17
TMEM53-209ENST00000495630 CALHM2Q9HA72 323 aa16.09■□□□□ 0.17
TMEM53-209ENST00000495630 BEX4Q9NWD9 120 aaPredicted RBP16.09■□□□□ 0.17
TMEM53-209ENST00000495630 JKAMPQ9P055 326 aa16.09■□□□□ 0.17
TMEM53-209ENST00000495630 HRNRQ86YZ3 2850 aaPredicted RBP16.08■□□□□ 0.16
TMEM53-209ENST00000495630 CLCA1A8K7I4 914 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 TP53I11O14683 189 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 HPNP05981 417 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 EPORP19235 508 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 SERPINB1P30740 379 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 SSR2P43308 183 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 CDK9P50750 372 aaKnown RBP16.08■□□□□ 0.16
TMEM53-209ENST00000495630 ARL4CP56559 192 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 SLC37A1P57057 533 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 DCAF7P61962 342 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 ZNF267Q14586 743 aaPredicted RBP16.08■□□□□ 0.16
TMEM53-209ENST00000495630 SPRED3Q2MJR0 410 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 FBXO48Q5FWF7 155 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 NHSL2Q5HYW2 709 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 DEPDC1Q5TB30 811 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 KHDRBS2Q5VWX1 349 aaKnown RBP16.08■□□□□ 0.16
TMEM53-209ENST00000495630 MED27Q6P2C8 311 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 RNF111Q6ZNA4 994 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 GPR180Q86V85 440 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 LRRC8AQ8IWT6 810 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 LAS2Q8IYD9 372 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 SPATA6LQ8N4H0 392 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 DIO2Q92813 273 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 TP53INP1Q96A56 240 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 ARSGQ96EG1 525 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 OSBPL9Q96SU4 736 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 SECISBP2Q96T21 854 aaKnown RBP16.08■□□□□ 0.16
TMEM53-209ENST00000495630 MCMBPQ9BTE3 642 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 DDX47Q9H0S4 455 aaKnown RBP16.08■□□□□ 0.16
TMEM53-209ENST00000495630 PRM3Q9NNZ6 103 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 CD274Q9NZQ7 290 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 ADGRE2Q9UHX3 823 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 PHF11Q9UIL8 331 aa16.08■□□□□ 0.16
TMEM53-209ENST00000495630 ARHGAP21Q5T5U3 1957 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 NINQ8N4C6 2090 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 MBD3L4A6NDZ8 208 aaPredicted RBP16.07■□□□□ 0.16
TMEM53-209ENST00000495630 MBD3L3A6NE82 208 aaPredicted RBP16.07■□□□□ 0.16
TMEM53-209ENST00000495630 MBD3L5A6NJ08 208 aaPredicted RBP16.07■□□□□ 0.16
TMEM53-209ENST00000495630 CES2O00748 559 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 CCNT2O60583 730 aaKnown RBP16.07■□□□□ 0.16
TMEM53-209ENST00000495630 WISP3O95389 354 aaPredicted RBP16.07■□□□□ 0.16
TMEM53-209ENST00000495630 GPR75O95800 540 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 CCDC166P0CW27 439 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 CD53P19397 219 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 GALNSP34059 522 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 ATP6V0D1P61421 351 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 HERVK_113P63132 956 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 ERVK-8P63133 956 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 NKX6-1P78426 367 aaPredicted RBP16.07■□□□□ 0.16
TMEM53-209ENST00000495630 PCDH1Q08174 1060 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 PACS2Q86VP3 889 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 ANKMY2Q8IV38 441 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 PDPRQ8NCN5 879 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 OR7G3Q8NG95 312 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 MBD3L2Q8NHZ7 208 aaPredicted RBP16.07■□□□□ 0.16
TMEM53-209ENST00000495630 RIT1Q92963 219 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 RGMAQ96B86 450 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 TSPAN17Q96FV3 270 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 DACH2Q96NX9 599 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 GAL3ST4Q96RP7 486 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 TRIB1Q96RU8 372 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 ERVK-6Q9BXR3 956 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 ANGPTL4Q9BY76 406 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 CD244Q9BZW8 370 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 UBQLN3Q9H347 655 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 CAMK2AQ9UQM7 478 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 ERVK-19Q9WJR5 959 aa16.07■□□□□ 0.16
TMEM53-209ENST00000495630 VPS13CQ709C8 3753 aa16.06■□□□□ 0.16
TMEM53-209ENST00000495630 OR10H2O60403 315 aa16.06■□□□□ 0.16
TMEM53-209ENST00000495630 SH3BGRLO75368 114 aa16.06■□□□□ 0.16
TMEM53-209ENST00000495630 LRATO95237 230 aa16.06■□□□□ 0.16
TMEM53-209ENST00000495630 HRGP04196 525 aa16.06■□□□□ 0.16
TMEM53-209ENST00000495630 PCNAP12004 261 aa16.06■□□□□ 0.16
TMEM53-209ENST00000495630 CD1DP15813 335 aa16.06■□□□□ 0.16
TMEM53-209ENST00000495630 BMP7P18075 431 aa16.06■□□□□ 0.16
TMEM53-209ENST00000495630 AGFG1P52594 562 aaKnown RBP16.06■□□□□ 0.16
TMEM53-209ENST00000495630 ARFIP1P53367 373 aa16.06■□□□□ 0.16
TMEM53-209ENST00000495630 EBPQ15125 230 aaKnown RBP16.06■□□□□ 0.16
TMEM53-209ENST00000495630 PCBP2Q15366 365 aaKnown RBP eCLIP16.06■□□□□ 0.16
TMEM53-209ENST00000495630 C18orf63Q68DL7 685 aa16.06■□□□□ 0.16
TMEM53-209ENST00000495630 TAOK1Q7L7X3 1001 aa16.06■□□□□ 0.16
TMEM53-209ENST00000495630 LRRC70Q7Z2Q7 622 aa16.06■□□□□ 0.16
TMEM53-209ENST00000495630 KRTAP1-3Q8IUG1 177 aa16.06■□□□□ 0.16
TMEM53-209ENST00000495630 ZCCHC7Q8N3Z6 543 aaKnown RBP16.06■□□□□ 0.16
TMEM53-209ENST00000495630 SPPL2AQ8TCT8 520 aa16.06■□□□□ 0.16
TMEM53-209ENST00000495630 DOK4Q8TEW6 326 aa16.06■□□□□ 0.16
TMEM53-209ENST00000495630 WDYHV1Q96HA8 205 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms