RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 CNTRLQ7Z7A1 2325 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 FLNCQ14315 2725 aa16.37■□□□□ 0.21
HDAC4-211ENST00000494800 ASH1LQ9NR48 2969 aaKnown RBP16.36■□□□□ 0.21
HDAC4-211ENST00000494800 TMEM200CA6NKL6 621 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 PCDH7O60245 1069 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 PORP16435 677 aaPredicted RBP16.36■□□□□ 0.21
HDAC4-211ENST00000494800 MST1P26927 711 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 GSTM5P46439 218 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 KCNK10P57789 538 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 SRSF11Q05519 484 aaKnown RBP16.36■□□□□ 0.21
HDAC4-211ENST00000494800 MPEG1Q2M385 716 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 SPDYAQ5MJ70 313 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 SLC48A1Q6P1K1 146 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 RTL4Q6ZR62 310 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 TRABD2AQ86V40 505 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 CHTF18Q8WVB6 975 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 SGCZQ96LD1 299 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 GAL3ST4Q96RP7 486 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 KCNA7Q96RP8 456 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 PARD6BQ9BYG5 372 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 ACPTQ9BZG2 426 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 ERRFI1Q9UJM3 462 aaPredicted RBP16.36■□□□□ 0.21
HDAC4-211ENST00000494800 PLLPQ9Y342 182 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 ZNF780BQ9Y6R6 833 aa16.36■□□□□ 0.21
HDAC4-211ENST00000494800 RP1L1Q8IWN7 2480 aaPredicted RBP16.35■□□□□ 0.21
HDAC4-211ENST00000494800 SERTM1A2A2V5 107 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 WASHC1A8K0Z3 465 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 NPIPA5E9PKD4 350 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 LRRTM2O43300 516 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 PEX1O43933 1283 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 ERAL1O75616 437 aaKnown RBP16.35■□□□□ 0.21
HDAC4-211ENST00000494800 OR6B1O95007 311 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 STSP08842 583 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 CPMP14384 443 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 CSNK2A2P19784 350 aaPredicted RBP16.35■□□□□ 0.21
HDAC4-211ENST00000494800 NT5EP21589 574 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 SOX3P41225 446 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 ALDH9A1P49189 494 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 MEOX1P50221 254 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 HEPACAMQ14CZ8 416 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 HLA-DQA1Q5Y7H0 255 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 C16orf47Q6ZP98 133 aaPredicted RBP16.35■□□□□ 0.21
HDAC4-211ENST00000494800 DGAT2L6Q6ZPD8 337 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 ZNF227Q86WZ6 799 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 SULF2Q8IWU5 870 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 C9orf40Q8IXQ3 194 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 DND1Q8IYX4 353 aaKnown RBP16.35■□□□□ 0.21
HDAC4-211ENST00000494800 MREGQ8N565 214 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 CPSF7Q8N684 471 aaKnown RBP16.35■□□□□ 0.21
HDAC4-211ENST00000494800 SLC15A4Q8N697 577 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 BANPQ8N9N5 519 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 GOLM1Q8NBJ4 401 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 PSD4Q8NDX1 1056 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 TM4SF18Q96CE8 201 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 KLHL29Q96CT2 875 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 MAGED4Q96JG8 741 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 GPR137Q96N19 417 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 TRMOQ9BU70 441 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 CXorf21Q9HAI6 301 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 RRAGDQ9NQL2 400 aaPredicted RBP16.35■□□□□ 0.21
HDAC4-211ENST00000494800 SENP1Q9P0U3 644 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 NPIPA1Q9UND3 350 aa16.35■□□□□ 0.21
HDAC4-211ENST00000494800 UBFD1O14562 309 aaKnown RBP16.34■□□□□ 0.21
HDAC4-211ENST00000494800 TFECO14948 347 aaPredicted RBP16.34■□□□□ 0.21
HDAC4-211ENST00000494800 TRIM13O60858 407 aa16.34■□□□□ 0.21
HDAC4-211ENST00000494800 CHEK2O96017 543 aa16.34■□□□□ 0.21
HDAC4-211ENST00000494800 UROSP10746 265 aa16.34■□□□□ 0.21
HDAC4-211ENST00000494800 DRD2P14416 443 aa16.34■□□□□ 0.21
HDAC4-211ENST00000494800 HTR6P50406 440 aa16.34■□□□□ 0.21
HDAC4-211ENST00000494800 HMGCS1Q01581 520 aa16.34■□□□□ 0.21
HDAC4-211ENST00000494800 PIGGQ5H8A4 983 aa16.34■□□□□ 0.21
HDAC4-211ENST00000494800 MDGA2Q7Z553 956 aa16.34■□□□□ 0.21
HDAC4-211ENST00000494800 C10orf107Q8IVU9 208 aa16.34■□□□□ 0.21
HDAC4-211ENST00000494800 SAMD14Q8IZD0 417 aaPredicted RBP16.34■□□□□ 0.21
HDAC4-211ENST00000494800 TAGAPQ8N103 731 aa16.34■□□□□ 0.21
HDAC4-211ENST00000494800 PSMG3-AS1Q96PY0 264 aa16.34■□□□□ 0.21
HDAC4-211ENST00000494800 C12orf65Q9H3J6 166 aaKnown RBP16.34■□□□□ 0.21
HDAC4-211ENST00000494800 PFDN4Q9NQP4 134 aa16.34■□□□□ 0.21
HDAC4-211ENST00000494800 GIMAP4Q9NUV9 329 aa16.34■□□□□ 0.21
HDAC4-211ENST00000494800 ESPL1Q14674 2120 aa16.34■□□□□ 0.21
HDAC4-211ENST00000494800 TRGV8A0A0C4DH27 118 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 C2orf92A0A1B0GVN3 265 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 ACOT7O00154 380 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 HRKO00198 91 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 P04436 131 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 CHN1P15882 459 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 SERPINB3P29508 390 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 TIA1P31483 386 aaKnown RBP eCLIP16.33■□□□□ 0.2
HDAC4-211ENST00000494800 SLC37A1P57057 533 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 BTKQ06187 659 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 PCLAFQ15004 111 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 KRT71Q3SY84 523 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 GALNT18Q6P9A2 607 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 BNC2Q6ZN30 1099 aaPredicted RBP16.33■□□□□ 0.2
HDAC4-211ENST00000494800 GK5Q6ZS86 529 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 GHDCQ8N2G8 530 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 OR7G1Q8NGA0 311 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 UCN3Q969E3 161 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 FAM111AQ96PZ2 611 aa16.33■□□□□ 0.2
HDAC4-211ENST00000494800 TMEM109Q9BVC6 243 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms