RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 PINK1Q9BXM7 581 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 TSPYL1Q9H0U9 437 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 LIME1Q9H400 295 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 COPS7AQ9UBW8 275 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 APPL1Q9UKG1 709 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 NIP7Q9Y221 180 aaKnown RBP eCLIP3.65□□□□□ -1.83
SMC4-224ENST00000494612 RPGRIP1LQ68CZ1 1315 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 ATP7AQ04656 1500 aa3.65□□□□□ -1.83
SMC4-224ENST00000494612 CDC42BPAQ5VT25 1732 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 SYNMO15061 1565 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 VWDEQ8N2E2 1590 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 ALKQ9UM73 1620 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 IGHV4-30-2A0A087WSY4 118 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 YJEFN3A6XGL0 299 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 ARHGEF33A8MVX0 844 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 DCXO43602 365 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 DUSP11O75319 330 aaKnown RBP3.64□□□□□ -1.83
SMC4-224ENST00000494612 BAG2O95816 211 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 PCP11498 1178 aaKnown RBP3.64□□□□□ -1.83
SMC4-224ENST00000494612 FCGR2BP31994 310 aaPredicted RBP3.64□□□□□ -1.83
SMC4-224ENST00000494612 FCGR2CP31995 323 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 NSFP46459 744 aaKnown RBP3.64□□□□□ -1.83
SMC4-224ENST00000494612 CCR4P51679 360 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 HNRNPFP52597 415 aaKnown RBP3.64□□□□□ -1.83
SMC4-224ENST00000494612 LIMK2P53671 638 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 SRP54P61011 504 aaKnown RBP3.64□□□□□ -1.83
SMC4-224ENST00000494612 MS4A2Q01362 244 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 ELAVL2Q12926 359 aaKnown RBP3.64□□□□□ -1.83
SMC4-224ENST00000494612 PPP1R8Q12972 351 aaKnown RBP3.64□□□□□ -1.83
SMC4-224ENST00000494612 LY6DQ14210 128 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 P2RY14Q15391 338 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 OR1C1Q15619 314 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 UPP1Q16831 310 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 RTL6Q6ICC9 239 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 RAB12Q6IQ22 244 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 ZNF343Q6P1L6 599 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 STXBP4Q6ZWJ1 553 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 RABEPKQ7Z6M1 372 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 ADAMTSL2Q86TH1 951 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 PARP8Q8N3A8 854 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 RTL3Q8N8U3 475 aaKnown RBP3.64□□□□□ -1.83
SMC4-224ENST00000494612 C8orf46Q8TAG6 207 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 URGCPQ8TCY9 931 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 PCNPQ8WW12 178 aaKnown RBP3.64□□□□□ -1.83
SMC4-224ENST00000494612 ESAMQ96AP7 390 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 S1PR3Q99500 378 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 ZNF577Q9BSK1 485 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 NUSAP1Q9BXS6 441 aaKnown RBP3.64□□□□□ -1.83
SMC4-224ENST00000494612 CARD9Q9H257 536 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 SLC26A1Q9H2B4 701 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 PARLQ9H300 379 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 SLC25A19Q9HC21 320 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 PIGVQ9NUD9 493 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 HMG20BQ9P0W2 317 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 UBQLN2Q9UHD9 624 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 TEKT2Q9UIF3 430 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 RNF215Q9Y6U7 377 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 A2MP01023 1474 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 IQGAP1P46940 1657 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 SYCP2Q9BX26 1530 aa3.64□□□□□ -1.83
SMC4-224ENST00000494612 TNRQ92752 1358 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.63□□□□□ -1.83
SMC4-224ENST00000494612 PLXNC1O60486 1568 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 NPHP4O75161 1426 aaPredicted RBP3.63□□□□□ -1.83
SMC4-224ENST00000494612 EEA1Q15075 1411 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 ADGBQ8N7X0 1667 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 TRGV8A0A0C4DH27 118 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 IGLON5A6NGN9 336 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 K7ERI5 159 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 EEF2KO00418 725 aaKnown RBP3.63□□□□□ -1.83
SMC4-224ENST00000494612 FBP2O00757 339 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 ZBTB14O43829 449 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 TXNDC12O95881 172 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 SLC4A1P02730 911 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 FHP07954 510 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 CYP3A5P20815 502 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 TKTL1P51854 596 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 CASP9P55211 416 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 MSLNQ13421 630 aaPredicted RBP3.63□□□□□ -1.83
SMC4-224ENST00000494612 SLC17A1Q14916 467 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 CARTPTQ16568 116 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 GPAT3Q53EU6 434 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 PAQR6Q6TCH4 344 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 Q6ZRG5 221 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 GPRIN3Q6ZVF9 776 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 BNIPLQ7Z465 357 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 ZNF440Q8IYI8 595 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 BANPQ8N9N5 519 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 TMEM185AQ8NFB2 350 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 OR52E1Q8NGJ3 308 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 TCP11Q8WWU5 503 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 NABP1Q96AH0 204 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 RPGRIP1Q96KN7 1286 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 ANKRD27Q96NW4 1050 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 RCHY1Q96PM5 261 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 TMEM237Q96Q45 408 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 TAAR6Q96RI8 345 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 RAB40CQ96S21 281 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 NAP1L3Q99457 506 aaPredicted RBP3.63□□□□□ -1.83
SMC4-224ENST00000494612 JPH2Q9BR39 696 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms