RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 LOC102723532A0A0G2JNH3 316 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 TCRBV9S1A1TA0A576 114 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 AQP12BA6NM10 295 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 TTLL8A6PVC2 850 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 PRMT5O14744 637 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-234ENST00000493923 SERPINI2O75830 405 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 UPK1BO75841 260 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 SLCO2B1O94956 709 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 C1orf105O95561 183 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 CD247P20963 164 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 IL10P22301 178 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 CFL1P23528 166 aaKnown RBP7.73□□□□□ -1.17
HDAC6-234ENST00000493923 FMO4P31512 558 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 DDOSTP39656 456 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 SLC9A3P48764 834 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 RAB28P51157 221 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 CDH15P55291 814 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 ABCE1P61221 599 aaKnown RBP7.73□□□□□ -1.17
HDAC6-234ENST00000493923 PRAMEP78395 509 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 CD300CQ08708 224 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 STX5Q13190 355 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 MRPL49Q13405 166 aaKnown RBP7.73□□□□□ -1.17
HDAC6-234ENST00000493923 SQLEQ14534 574 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 GBX1Q14549 363 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 KIR2DS3Q14952 304 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 INPP5JQ15735 1006 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-234ENST00000493923 NRF1Q16656 503 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 PLEKHN1Q494U1 663 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-234ENST00000493923 NKAIN1Q4KMZ8 207 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.73□□□□□ -1.17
HDAC6-234ENST00000493923 PCID2Q5JVF3 399 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 SAMD4BQ5PRF9 694 aaKnown RBP7.73□□□□□ -1.17
HDAC6-234ENST00000493923 AGAP6Q5VW22 663 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 SLC6A19Q695T7 634 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 FRMPD2BQ6IN97 320 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 JMJD6Q6NYC1 403 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-234ENST00000493923 PRMT9Q6P2P2 845 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 FIGLAQ6QHK4 219 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 HACD2Q6Y1H2 254 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 CYS1Q717R9 158 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 GALNT7Q86SF2 657 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 ADCK1Q86TW2 530 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 AQP12AQ8IXF9 295 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 SLC38A6Q8IZM9 456 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 OR4N4Q8N0Y3 316 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 PPHLN1Q8NEY8 458 aaKnown RBP7.73□□□□□ -1.17
HDAC6-234ENST00000493923 OR6Q1Q8NGQ2 317 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 OR2L8Q8NGY9 312 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 CPT1CQ8TCG5 803 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 LPGAT1Q92604 370 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.73□□□□□ -1.17
HDAC6-234ENST00000493923 TP53INP1Q96A56 240 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 RDH12Q96NR8 316 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 AGAP4Q96P64 663 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 APOL4Q9BPW4 351 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 TRAF4Q9BUZ4 470 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-234ENST00000493923 ACAT2Q9BWD1 397 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 ZNF717Q9BY31 904 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-234ENST00000493923 CHRNA10Q9GZZ6 450 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 KCNN2Q9H2S1 579 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 MOCS1Q9NZB8 636 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 POLG2Q9UHN1 485 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 ATP6V1HQ9UI12 483 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 PLCL2Q9UPR0 1127 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 NTNG1Q9Y2I2 539 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 SNX5Q9Y5X3 404 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 SCN2AQ99250 2005 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 LRBAP50851 2863 aa7.73□□□□□ -1.17
HDAC6-234ENST00000493923 PCNX1Q96RV3 2341 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 C9J4A7 227 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 M0R3G1 203 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 QSOX1O00391 747 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 SOCS6O14544 535 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 FFAR3O14843 346 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 AIM2O14862 343 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 GPR42O15529 346 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 MRPS14O60783 128 aaKnown RBP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 UGT2B11O75310 529 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 VAPBO95292 243 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 RASAL1O95294 804 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 ALBP02768 609 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 APOA4P06727 396 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 TCN1P20061 433 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 CD9P21926 228 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 RPS3P23396 243 aaKnown RBP eCLIP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 ARL1P40616 181 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 OR1D4P47884 311 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 OR3A3P47888 321 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 ETV1P50549 477 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 EFNA3P52797 238 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 VSX2P58304 361 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 DCDP81605 110 aaKnown RBP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 Q0VFX4 171 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 BNIP2Q12982 314 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 BAMBIQ13145 260 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 KCNJ11Q14654 390 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 ATP6AP1Q15904 470 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 HIST2H2ACQ16777 129 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 PGS1Q32NB8 556 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms