RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 OR7G3Q8NG95 312 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 UBTD2Q8WUN7 234 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 HSD17B8Q92506 261 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 LRR1Q96L50 414 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 ASB8Q9H765 288 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 SCPEP1Q9HB40 452 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 KCTD5Q9NXV2 234 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 IL17CQ9P0M4 197 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 ZNF624Q9P2J8 865 aaPredicted RBP11.12□□□□□ -0.63
HDAC4-210ENST00000493582 COL4A4P53420 1690 aaPredicted RBP11.12□□□□□ -0.63
HDAC4-210ENST00000493582 SMIM35A0A1B0GVV1 85 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 POM121CA8CG34 1229 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 SOD1P00441 154 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 LALBAP00709 142 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 DPEP1P16444 411 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 CHI3L1P36222 383 aaPredicted RBP11.12□□□□□ -0.63
HDAC4-210ENST00000493582 ERVFC1P60507 584 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 HBA1P69905 142 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 ILKQ13418 452 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 TMEM201Q5SNT2 666 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 GPRC6AQ5T6X5 926 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 ADNP2Q6IQ32 1131 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 C1orf52Q8N6N3 182 aaKnown RBP11.12□□□□□ -0.63
HDAC4-210ENST00000493582 PLA2G15Q8NCC3 412 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 NEIL3Q8TAT5 605 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 GEMIN6Q8WXD5 167 aaKnown RBP11.12□□□□□ -0.63
HDAC4-210ENST00000493582 ATG10Q9H0Y0 220 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 SAV1Q9H4B6 383 aaPredicted RBP11.12□□□□□ -0.63
HDAC4-210ENST00000493582 ADAM30Q9UKF2 790 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 SLC9A8Q9Y2E8 581 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 PCDHB9Q9Y5E1 797 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 PIKFYVEQ9Y2I7 2098 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 SLC22A23A1A5C7 686 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 EEF1E1O43324 174 aaKnown RBP11.12□□□□□ -0.63
HDAC4-210ENST00000493582 RECKO95980 971 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 OR56A5P0C7T3 313 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 CR2P20023 1033 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 PRPH2P23942 346 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 RNASE12Q5GAN4 147 aaKnown RBP11.12□□□□□ -0.63
HDAC4-210ENST00000493582 MARCH9Q86YJ5 346 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 SLC30A8Q8IWU4 369 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 FTMTQ8N4E7 242 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 ANKRD53Q8N9V6 530 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 VPS37AQ8NEZ2 397 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 OR6J1Q8NGC5 347 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 OR2T35Q8NGX2 323 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 CXorf58Q96LI9 332 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 NLNQ9BYT8 704 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 POLR2J3Q9H1A7 115 aaKnown RBP11.12□□□□□ -0.63
HDAC4-210ENST00000493582 IMP3Q9NV31 184 aaKnown RBP11.12□□□□□ -0.63
HDAC4-210ENST00000493582 LYARQ9NX58 379 aaKnown RBP11.12□□□□□ -0.63
HDAC4-210ENST00000493582 TMEM161AQ9NX61 479 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 SRRDQ9UH36 339 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 SPATA2Q9UM82 520 aa11.12□□□□□ -0.63
HDAC4-210ENST00000493582 PLXNB2O15031 1838 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 TCRBV16S1A1N1A0A5B0 115 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 H7C0S8 307 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 GPR171O14626 319 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 SCAMP2O15127 329 aaKnown RBP11.11□□□□□ -0.63
HDAC4-210ENST00000493582 OR12D1P0DN82 309 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 RHCEP18577 417 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 GRK4P32298 578 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 OPRD1P41143 372 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 CDK6Q00534 326 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 ACSM2AQ08AH3 577 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 CHIT1Q13231 466 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 BOP1Q14137 746 aaKnown RBP11.11□□□□□ -0.63
HDAC4-210ENST00000493582 PUM1Q14671 1186 aaKnown RBP eCLIP11.11□□□□□ -0.63
HDAC4-210ENST00000493582 SYT14P1Q58G82 188 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 GCNT6Q5T4J0 391 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 ACSM2BQ68CK6 577 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 LINGO4Q6UY18 593 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 TFAP2EQ6VUC0 442 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 RASSF6Q6ZTQ3 369 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 LHFPL3Q86UP9 236 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 HERVK_113Q902F9 699 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 UFD1Q92890 307 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 PTP4A1Q93096 173 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 RFT1Q96AA3 541 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 FOPNLQ96NB1 174 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 USB1Q9BQ65 265 aaKnown RBP11.11□□□□□ -0.63
HDAC4-210ENST00000493582 RNF32Q9H0A6 362 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 DLL4Q9NR61 685 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 ENAMQ9NRM1 1142 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 VPS29Q9UBQ0 182 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 PHF11Q9UIL8 331 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 PIPSLA2A3N6 862 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 GSAPA4D1B5 854 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 CD8B2A6NJW9 211 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 STK25O00506 426 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 APBA3O96018 575 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 CD8BP10966 210 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 WDR5P61964 334 aaKnown RBP11.11□□□□□ -0.63
HDAC4-210ENST00000493582 DSC1Q08554 894 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 LRRC74AQ0VAA2 488 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 TPBGQ13641 420 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 ARHGAP15Q53QZ3 475 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 C10orf120Q5SQS8 335 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 IDNKQ5T6J7 187 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 CD276Q5ZPR3 534 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms