RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 HRKO00198 91 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 DNALI1O14645 258 aaPredicted RBP16.17■□□□□ 0.18
NUP50-218ENST00000493456 PRAMEF4O60810 478 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 SNX4O95219 450 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 LRATO95237 230 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 ALOX15P16050 662 aaPredicted RBP16.17■□□□□ 0.18
NUP50-218ENST00000493456 SSR2P43308 183 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 RCAN2Q14206 197 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 FRG1Q14331 258 aaKnown RBP16.17■□□□□ 0.18
NUP50-218ENST00000493456 EBPQ15125 230 aaKnown RBP16.17■□□□□ 0.18
NUP50-218ENST00000493456 RPS6KA2Q15349 733 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 PDK4Q16654 411 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 CDKL4Q5MAI5 379 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 PRAMEF9Q5VWM5 478 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 RNF111Q6ZNA4 994 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 ZC3HC1Q86WB0 502 aaKnown RBP16.17■□□□□ 0.18
NUP50-218ENST00000493456 OR4N5Q8IXE1 308 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 ST13P4Q8IZP2 240 aaPredicted RBP16.17■□□□□ 0.18
NUP50-218ENST00000493456 SNX31Q8N9S9 440 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 SPATA3Q8NHX4 192 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 ANKRD49Q8WVL7 239 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 ZNF592Q92610 1267 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 PPWD1Q96BP3 646 aaKnown RBP16.17■□□□□ 0.18
NUP50-218ENST00000493456 CFAP36Q96G28 342 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 MS4A14Q96JA4 679 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 VPS39Q96JC1 886 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 PBKQ96KB5 322 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 SECISBP2Q96T21 854 aaKnown RBP16.17■□□□□ 0.18
NUP50-218ENST00000493456 KRT12Q99456 494 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 RBM24Q9BX46 236 aaKnown RBP16.17■□□□□ 0.18
NUP50-218ENST00000493456 RPF2Q9H7B2 306 aaKnown RBP16.17■□□□□ 0.18
NUP50-218ENST00000493456 POPDC3Q9HBV1 291 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 COL6A5A8TX70 2615 aa16.17■□□□□ 0.18
NUP50-218ENST00000493456 CSPG4Q6UVK1 2322 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 A0A1W2PPR1 153 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 PGRMC1O00264 195 aaKnown RBP16.16■□□□□ 0.18
NUP50-218ENST00000493456 RTCAO00442 366 aaKnown RBP16.16■□□□□ 0.18
NUP50-218ENST00000493456 TAPBPO15533 448 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 SMPD2O60906 423 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 STK16O75716 305 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 TMIGD3P0DMS9 266 aaPredicted RBP16.16■□□□□ 0.18
NUP50-218ENST00000493456 CD22P20273 847 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 SERPINB1P30740 379 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 MASP1P48740 699 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 TMED10P49755 219 aaKnown RBP16.16■□□□□ 0.18
NUP50-218ENST00000493456 AGFG1P52594 562 aaKnown RBP16.16■□□□□ 0.18
NUP50-218ENST00000493456 SLC37A1P57057 533 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 TAS2R39P59534 338 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 HERVK_113P63132 956 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 ERVK-8P63133 956 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 TBCCQ15814 346 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 STEAP4Q687X5 459 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 PRSS57Q6UWY2 283 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 DGAT2L6Q6ZPD8 337 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 CAPN12Q6ZSI9 719 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 PACS2Q86VP3 889 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 ZPLD1Q8TCW7 415 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 ZNF473Q8WTR7 871 aaKnown RBP16.16■□□□□ 0.18
NUP50-218ENST00000493456 PIGTQ969N2 578 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 UBE2E3Q969T4 207 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 WDYHV1Q96HA8 205 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 RILPQ96NA2 401 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 ZFP3Q96NJ6 502 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 REPIN1Q9BWE0 567 aaKnown RBP16.16■□□□□ 0.18
NUP50-218ENST00000493456 SFXN3Q9BWM7 321 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 ERVK-6Q9BXR3 956 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 UGT2B28Q9BY64 529 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 DERL2Q9GZP9 239 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 PRM3Q9NNZ6 103 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 ASIC3Q9UHC3 531 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 PHF11Q9UIL8 331 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 ERVK-19Q9WJR5 959 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 EIF3LQ9Y262 564 aaKnown RBP16.16■□□□□ 0.18
NUP50-218ENST00000493456 C15orf41Q9Y2V0 281 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 SLC6A5Q9Y345 797 aa16.16■□□□□ 0.18
NUP50-218ENST00000493456 GOLGA6L10A0A0M3HER8 536 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 H7C1Q1 480 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 ACSL3O95573 720 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 BMP7P18075 431 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 PCSK6P29122 969 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 TLX1P31314 330 aaPredicted RBP16.15■□□□□ 0.18
NUP50-218ENST00000493456 ELK3P41970 407 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 CPA2P48052 419 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 RPP38P78345 283 aaKnown RBP16.15■□□□□ 0.18
NUP50-218ENST00000493456 TNFRSF17Q02223 184 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 IRF8Q02556 426 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 ILF2Q12905 390 aaKnown RBP16.15■□□□□ 0.18
NUP50-218ENST00000493456 E2F2Q14209 437 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 SULT1C3Q6IMI6 304 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 CXXC5Q7LFL8 322 aaKnown RBP16.15■□□□□ 0.18
NUP50-218ENST00000493456 PDIK1LQ8N165 341 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 C9orf106Q8NAJ2 232 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 ABTB1Q969K4 478 aaPredicted RBP16.15■□□□□ 0.18
NUP50-218ENST00000493456 LRRC39Q96DD0 335 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 BDH2Q9BUT1 245 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 ANGPTL4Q9BY76 406 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 SNX15Q9NRS6 342 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 GALNT8Q9NY28 637 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 CHMP2BQ9UQN3 213 aa16.15■□□□□ 0.18
NUP50-218ENST00000493456 PSAT1Q9Y617 370 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms