RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 DGAT2Q96PD7 388 aa18.34■□□□□ 0.53
NELFE-212ENST00000492539 CNPPD1Q9BV87 410 aa18.34■□□□□ 0.53
NELFE-212ENST00000492539 TMUB1Q9BVT8 246 aa18.34■□□□□ 0.53
NELFE-212ENST00000492539 CD244Q9BZW8 370 aa18.34■□□□□ 0.53
NELFE-212ENST00000492539 PCDHGB3Q9Y5G1 929 aa18.34■□□□□ 0.53
NELFE-212ENST00000492539 A0A087X1B8 175 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 FAM47E-STBD1D6RA91 191 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 ALDOAP04075 364 aaKnown RBP18.33■□□□□ 0.52
NELFE-212ENST00000492539 GABRA1P14867 456 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 SSR2P43308 183 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 MAGEA12P43365 314 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 PCDH1Q08174 1060 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 TBL3Q12788 808 aaKnown RBP18.33■□□□□ 0.52
NELFE-212ENST00000492539 BIKQ13323 160 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 AP5B1Q2VPB7 878 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 SLC22A10Q63ZE4 541 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 MED27Q6P2C8 311 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 EMBQ6PCB8 327 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 DGAT2L6Q6ZPD8 337 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 CHSY3Q70JA7 882 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 TBC1D1Q86TI0 1168 aaPredicted RBP18.33■□□□□ 0.52
NELFE-212ENST00000492539 OR4N5Q8IXE1 308 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 LRRC25Q8N386 305 aaPredicted RBP18.33■□□□□ 0.52
NELFE-212ENST00000492539 SLC15A4Q8N697 577 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 UBLCP1Q8WVY7 318 aaPredicted RBP18.33■□□□□ 0.52
NELFE-212ENST00000492539 SPACA9Q96E40 222 aaPredicted RBP18.33■□□□□ 0.52
NELFE-212ENST00000492539 FOXC2Q99958 501 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 PARD6BQ9BYG5 372 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 PROK2Q9HC23 129 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 RNF112Q9ULX5 631 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 ACOT9Q9Y305 439 aa18.33■□□□□ 0.52
NELFE-212ENST00000492539 FAM221AA4D161 298 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 HRKO00198 91 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 SH3BGRLO75368 114 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 CTAG2O75638 210 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 TGFB1P01137 390 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 C2P06681 752 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 RFPL3SP0C7P2 107 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 TYK2P29597 1187 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 SERPINB1P30740 379 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 FOLH1Q04609 750 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 DEPDC1Q5TB30 811 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 LGSNQ5TDP6 509 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 KHDRBS2Q5VWX1 349 aaKnown RBP18.32■□□□□ 0.52
NELFE-212ENST00000492539 ARSKQ6UWY0 536 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 DND1Q8IYX4 353 aaKnown RBP18.32■□□□□ 0.52
NELFE-212ENST00000492539 CNPY4Q8N129 248 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 FBXW8Q8N3Y1 598 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 OR7G3Q8NG95 312 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 PPWD1Q96BP3 646 aaKnown RBP18.32■□□□□ 0.52
NELFE-212ENST00000492539 CMTM7Q96FZ5 175 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 POM121Q96HA1 1249 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 FBXL20Q96IG2 436 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 ART5Q96L15 291 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 ZFP64Q9NPA5 681 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 RYDENQ9NUL5 291 aaKnown RBP18.32■□□□□ 0.52
NELFE-212ENST00000492539 MS4A12Q9NXJ0 267 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 QPCTLQ9NXS2 382 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 DNAJB12Q9NXW2 375 aaKnown RBP18.32■□□□□ 0.52
NELFE-212ENST00000492539 NUDT4Q9NZJ9 180 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 B4GALT7Q9UBV7 327 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 RAB21Q9UL25 225 aa18.32■□□□□ 0.52
NELFE-212ENST00000492539 BOKQ9UMX3 212 aaPredicted RBP18.32■□□□□ 0.52
NELFE-212ENST00000492539 VPS13CQ709C8 3753 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 A0A096LPK6 155 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 LRRC3CA6NJW4 275 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 SAP18O00422 153 aaKnown RBP18.31■□□□□ 0.52
NELFE-212ENST00000492539 S100BP04271 92 aaPredicted RBP18.31■□□□□ 0.52
NELFE-212ENST00000492539 TUBBP07437 444 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 LTA4HP09960 611 aaKnown RBP18.31■□□□□ 0.52
NELFE-212ENST00000492539 FBXO45P0C2W1 286 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 PCNAP12004 261 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 PLIN5Q00G26 463 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 DLG1Q12959 904 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 SLAMF1Q13291 335 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 PRAMEF20Q5VT98 475 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 OR4C11Q6IEV9 310 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 SEM1Q6ZVN7 128 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 UBTD2Q8WUN7 234 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 TANKQ92844 425 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 EXT2Q93063 718 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 CAVIN3Q969G5 261 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 RBM18Q96H35 190 aaKnown RBP18.31■□□□□ 0.52
NELFE-212ENST00000492539 SORBS1Q9BX66 1292 aaKnown RBP18.31■□□□□ 0.52
NELFE-212ENST00000492539 OR51B5Q9H339 312 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 EXO5Q9H790 373 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 RPF2Q9H7B2 306 aaKnown RBP18.31■□□□□ 0.52
NELFE-212ENST00000492539 PPCSQ9HAB8 311 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 NMRAL1Q9HBL8 299 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 ACKR4Q9NPB9 350 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 ZNF358Q9NW07 568 aa18.31■□□□□ 0.52
NELFE-212ENST00000492539 CHCHD2Q9Y6H1 151 aaPredicted RBP18.31■□□□□ 0.52
NELFE-212ENST00000492539 EXPH5Q8NEV8 1989 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 TRIM49D1C9J1S8 452 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 DYRK3O43781 588 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 DIAPH2O60879 1101 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 SNRPAP09012 282 aaKnown RBP18.3■□□□□ 0.52
NELFE-212ENST00000492539 CD99P14209 185 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 ALOX15P16050 662 aaPredicted RBP18.3■□□□□ 0.52
NELFE-212ENST00000492539 GMPRP36959 345 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms