RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CHRNB4P30926 498 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 TLX1P31314 330 aaPredicted RBP7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 SOX18P35713 384 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 MAGEA5P43359 124 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 SERPINB8P50452 374 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 NEK2P51955 445 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 KRTAP10-9P60411 292 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 PLIN5Q00G26 463 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 ASPHQ12797 758 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 TRAF3Q13114 568 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 EBPQ15125 230 aaKnown RBP7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 NTRK2Q16620 822 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 CPSF6Q16630 551 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 GGTA1PQ4G0N0 100 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 SLC22A10Q63ZE4 541 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 CEP128Q6ZU80 1094 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 ACAD11Q709F0 780 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 FBXW8Q8N3Y1 598 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 RPRMLQ8N4K4 120 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 ZNF615Q8N8J6 731 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 C17orf47Q8NEP4 570 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 MYRIPQ8NFW9 859 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 OR52B6Q8NGF0 335 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 CA5BP1Q8WTZ4 195 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 RND1Q92730 232 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 UCN3Q969E3 161 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 TP53INP1Q96A56 240 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 SPACA9Q96E40 222 aaPredicted RBP7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 DGAT2Q96PD7 388 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 SERPINI1Q99574 410 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 CENPKQ9BS16 269 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 TTYH2Q9BSA4 534 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 WWTR1Q9GZV5 400 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 TSPYL1Q9H0U9 437 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 ACTR8Q9H981 624 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 CXorf21Q9HAI6 301 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 QPCTLQ9NXS2 382 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 TUBA8Q9NY65 449 aaPredicted RBP7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 COQ3Q9NZJ6 369 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 CNIH4Q9P003 139 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 DMGDHQ9UI17 866 aaKnown RBP7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 ZNF180Q9UJW8 692 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 PCTPQ9UKL6 214 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 CNOT11Q9UKZ1 510 aaKnown RBP7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 RNF6Q9Y252 685 aa7.72□□□□□ -1.17
SMARCB1-207ENST00000491967 MED12Q93074 2177 aa7.71□□□□□ -1.17
SMARCB1-207ENST00000491967 ABCA4P78363 2273 aa7.71□□□□□ -1.17
SMARCB1-207ENST00000491967 A0A1B0GTL3 188 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 LRRC3CA6NJW4 275 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 FAM166BA8MTA8 275 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 PGRMC2O15173 223 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 CDC40O60508 579 aaKnown RBP eCLIP7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 SH3BGRLO75368 114 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 TRIM3O75382 744 aaPredicted RBP7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 PRKRAO75569 313 aaKnown RBP7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 AIFM1O95831 613 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 P04436 131 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 SNRPB2P08579 225 aaKnown RBP7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 RPS17P08708 135 aaKnown RBP7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 CELA3AP09093 270 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 RFPL3SP0C7P2 107 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 GLI4P10075 376 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 NR2F6P10588 404 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 GFAPP14136 432 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 MSX1P28360 303 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 PHBP35232 272 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 PIGAP37287 484 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 BUD31P41223 144 aaPredicted RBP7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 DNASE1L1P49184 302 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 RAP1GDS1P52306 607 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 NUP107P57740 925 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 CKAP4Q07065 602 aaKnown RBP7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 MGAT2Q10469 447 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 PMPCAQ10713 525 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 SLC10A1Q14973 349 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 WHAMMP3Q1A5X7 153 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 FRG2Q64ET8 278 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 C8orf74Q6P047 294 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 KLC3Q6P597 504 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 FAM47EQ6ZV65 393 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 NUDT13Q86X67 352 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 DMRTC2Q8IXT2 367 aaPredicted RBP7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 METTL4Q8N3J2 472 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 SLC22A8Q8TCC7 542 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 DCAKDQ8WVC6 231 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 RIT1Q92963 219 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 ADIPOR1Q96A54 375 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 FRG2BQ96QU4 278 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 SMC6Q96SB8 1091 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 SECISBP2Q96T21 854 aaKnown RBP7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 UBQLN3Q9H347 655 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 ZNF703Q9H7S9 590 aaPredicted RBP7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 NOL11Q9H8H0 719 aaKnown RBP7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 MCCC2Q9HCC0 563 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 ZFP64Q9NPA5 681 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 PNPLA3Q9NST1 481 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 ZNF358Q9NW07 568 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 TNFRSF10DQ9UBN6 386 aa7.71□□□□□ -1.18
SMARCB1-207ENST00000491967 ZNF639Q9UID6 485 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms