RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ZNF473Q8WTR7 871 aaKnown RBP12.09□□□□□ -0.47
USF1-206ENST00000491629 LRRC46Q96FV0 321 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 FBXL20Q96IG2 436 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 GNRHR2Q96P88 292 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 KCNC2Q96PR1 638 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 TRIB1Q96RU8 372 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 MCMBPQ9BTE3 642 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 DOHHQ9BU89 302 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 WWTR1Q9GZV5 400 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 GPRC5BQ9NZH0 403 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 CAMK2AQ9UQM7 478 aa12.09□□□□□ -0.47
USF1-206ENST00000491629 ANKRD33BA6NCL7 494 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 INAFM1C9JVW0 142 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 GOSR1O95249 250 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 IL18BPO95998 194 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 HIST1H1TP22492 207 aaPredicted RBP12.08□□□□□ -0.48
USF1-206ENST00000491629 CPN2P22792 545 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 ELK3P41970 407 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 NAGLUP54802 743 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 FBXW4P57775 412 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 HERVK_113P63132 956 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 ERVK-8P63133 956 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 E2F2Q14209 437 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 SPATA6LQ8N4H0 392 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 NKAPQ8N5F7 415 aaKnown RBP12.08□□□□□ -0.48
USF1-206ENST00000491629 SPATA3Q8NHX4 192 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 SLC44A1Q8WWI5 657 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 ZNF592Q92610 1267 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 UCN3Q969E3 161 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 HSPBAP1Q96EW2 488 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 PTCD3Q96EY7 689 aaKnown RBP12.08□□□□□ -0.48
USF1-206ENST00000491629 CFAP36Q96G28 342 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 ZNF597Q96LX8 424 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 Q96MF0 132 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 DACH2Q96NX9 599 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 DGAT2Q96PD7 388 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 GAL3ST4Q96RP7 486 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 YIPF4Q9BSR8 244 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 TBCDQ9BTW9 1192 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 ERVK-6Q9BXR3 956 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 PPANQ9NQ55 473 aaKnown RBP12.08□□□□□ -0.48
USF1-206ENST00000491629 DNAJC11Q9NVH1 559 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 GALNT8Q9NY28 637 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 CTNNAL1Q9UBT7 734 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 CHMP2BQ9UQN3 213 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 ERVK-19Q9WJR5 959 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 IKBKGQ9Y6K9 419 aa12.08□□□□□ -0.48
USF1-206ENST00000491629 ABCA1O95477 2261 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 FAM95CA0A1B0GW59 222 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 A0A1W2PS29 197 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 SH3D21A4FU49 640 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 TRIM64A6NGJ6 449 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 TRIM64BA6NI03 449 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 SAP18O00422 153 aaKnown RBP12.07□□□□□ -0.48
USF1-206ENST00000491629 DNALI1O14645 258 aaPredicted RBP12.07□□□□□ -0.48
USF1-206ENST00000491629 SMAD7O15105 426 aaKnown RBP12.07□□□□□ -0.48
USF1-206ENST00000491629 TRAPPC6AO75865 159 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 SERPINB3P29508 390 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 OPRM1P35372 400 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 CASP2P42575 452 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 MSH2P43246 934 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 HSPA7P48741 367 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 HNRNPH2P55795 449 aaKnown RBP12.07□□□□□ -0.48
USF1-206ENST00000491629 TBL3Q12788 808 aaKnown RBP12.07□□□□□ -0.48
USF1-206ENST00000491629 ZNF267Q14586 743 aaPredicted RBP12.07□□□□□ -0.48
USF1-206ENST00000491629 WIPI1Q5MNZ9 446 aaPredicted RBP12.07□□□□□ -0.48
USF1-206ENST00000491629 SYDE1Q6ZW31 735 aaPredicted RBP12.07□□□□□ -0.48
USF1-206ENST00000491629 ADGRE4PQ86SQ3 457 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 ADAMTSL2Q86TH1 951 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 PM20D2Q8IYS1 436 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 NANOS1Q8WY41 292 aaKnown RBP12.07□□□□□ -0.48
USF1-206ENST00000491629 SMPDL3BQ92485 455 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 DIO2Q92813 273 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 RILPQ96NA2 401 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 NAT9Q9BTE0 207 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 G6PC3Q9BUM1 346 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 REPIN1Q9BWE0 567 aaKnown RBP12.07□□□□□ -0.48
USF1-206ENST00000491629 RBM24Q9BX46 236 aaKnown RBP12.07□□□□□ -0.48
USF1-206ENST00000491629 ANGPTL4Q9BY76 406 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 RPF2Q9H7B2 306 aaKnown RBP12.07□□□□□ -0.48
USF1-206ENST00000491629 CALHM2Q9HA72 323 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 C15orf41Q9Y2V0 281 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 TEX264Q9Y6I9 313 aa12.07□□□□□ -0.48
USF1-206ENST00000491629 FAM171A2A8MVW0 826 aa12.06□□□□□ -0.48
USF1-206ENST00000491629 CLGNO14967 610 aa12.06□□□□□ -0.48
USF1-206ENST00000491629 TGFB1P01137 390 aa12.06□□□□□ -0.48
USF1-206ENST00000491629 TMIGD3P0DMS9 266 aaPredicted RBP12.06□□□□□ -0.48
USF1-206ENST00000491629 COX7A2P14406 83 aa12.06□□□□□ -0.48
USF1-206ENST00000491629 ALOX15P16050 662 aaPredicted RBP12.06□□□□□ -0.48
USF1-206ENST00000491629 CDC25BP30305 580 aa12.06□□□□□ -0.48
USF1-206ENST00000491629 GMPRP36959 345 aa12.06□□□□□ -0.48
USF1-206ENST00000491629 RPL21P46778 160 aaKnown RBP12.06□□□□□ -0.48
USF1-206ENST00000491629 CHIT1Q13231 466 aa12.06□□□□□ -0.48
USF1-206ENST00000491629 OR4D1Q15615 310 aa12.06□□□□□ -0.48
USF1-206ENST00000491629 SPRED3Q2MJR0 410 aa12.06□□□□□ -0.48
USF1-206ENST00000491629 DESI1Q6ICB0 168 aa12.06□□□□□ -0.48
USF1-206ENST00000491629 LUZP2Q86TE4 346 aa12.06□□□□□ -0.48
USF1-206ENST00000491629 DND1Q8IYX4 353 aaKnown RBP12.06□□□□□ -0.48
USF1-206ENST00000491629 LRRC75A-AS1Q8N1F1 130 aa12.06□□□□□ -0.48
USF1-206ENST00000491629 TRIM58Q8NG06 486 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms