RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 SGO1Q5FBB7 561 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 DEPDC1Q5TB30 811 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 RTL4Q6ZR62 310 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 ZNF227Q86WZ6 799 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 CCNYL1Q8N7R7 359 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 BANPQ8N9N5 519 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 OR4F6Q8NGB9 312 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 RND1Q92730 232 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 SDCCAG3Q96C92 435 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 CMTM7Q96FZ5 175 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 TMEM237Q96Q45 408 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 FAM173AQ9BQD7 235 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 PELOQ9BRX2 385 aaKnown RBP9.62□□□□□ -0.87
TTC28-207ENST00000490475 SORBS1Q9BX66 1292 aaKnown RBP9.62□□□□□ -0.87
TTC28-207ENST00000490475 MS4A8Q9BY19 250 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 ALOXE3Q9BYJ1 711 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 TRIM8Q9BZR9 551 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 ENKD1Q9H0I2 346 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 ZNF225Q9UK10 706 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 RRP15Q9Y3B9 282 aaKnown RBP9.62□□□□□ -0.87
TTC28-207ENST00000490475 PCDHGA11Q9Y5H2 935 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 ANKRD17O75179 2603 aaKnown RBP9.62□□□□□ -0.87
TTC28-207ENST00000490475 POLQO75417 2590 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 ZNF407Q9C0G0 2248 aa9.62□□□□□ -0.87
TTC28-207ENST00000490475 INTS1Q8N201 2190 aaKnown RBP9.61□□□□□ -0.87
TTC28-207ENST00000490475 A0A1B0GTH9 108 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 FIGNL2A6NMB9 653 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 BCKDKO14874 412 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 HS6ST1O60243 411 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 CDC40O60508 579 aaKnown RBP eCLIP9.61□□□□□ -0.87
TTC28-207ENST00000490475 OR2J2O76002 312 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 SCELO95171 688 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 ETHE1O95571 254 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 HOXD4P09016 255 aaPredicted RBP9.61□□□□□ -0.87
TTC28-207ENST00000490475 CPA3P15088 417 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 TNNI3P19429 210 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 CNR1P21554 472 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 PTX3P26022 381 aaPredicted RBP9.61□□□□□ -0.87
TTC28-207ENST00000490475 CERS1P27544 350 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 PTGER1P34995 402 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 PIK3CBP42338 1070 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 NAGLUP54802 743 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 CORO7P57737 925 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 RPS13P62277 151 aaKnown RBP9.61□□□□□ -0.87
TTC28-207ENST00000490475 MPEG1Q2M385 716 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 KRT71Q3SY84 523 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 CMPK2Q5EBM0 449 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 RNFT1Q5M7Z0 435 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 KHDRBS2Q5VWX1 349 aaKnown RBP9.61□□□□□ -0.87
TTC28-207ENST00000490475 TTC19Q6DKK2 380 aaPredicted RBP9.61□□□□□ -0.87
TTC28-207ENST00000490475 LETMD1Q6P1Q0 360 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 ZYG11AQ6WRX3 759 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 ZNF793Q6ZN11 406 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 CD163Q86VB7 1156 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 SLC22A9Q8IVM8 553 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 RIBC1Q8N443 379 aaPredicted RBP9.61□□□□□ -0.87
TTC28-207ENST00000490475 SLC15A4Q8N697 577 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 CCDC63Q8NA47 563 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 FAM47BQ8NA70 645 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 WDR20Q8TBZ3 569 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 REPS1Q96D71 796 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 ZIM3Q96PE6 472 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 CENPHQ9H3R5 247 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 DMRT3Q9NQL9 472 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 FARSBQ9NSD9 589 aaKnown RBP9.61□□□□□ -0.87
TTC28-207ENST00000490475 OXSMQ9NWU1 459 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 KCMF1Q9P0J7 381 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 SLC17A7Q9P2U7 560 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 PHF11Q9UIL8 331 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 PLLPQ9Y342 182 aa9.61□□□□□ -0.87
TTC28-207ENST00000490475 F8P00451 2351 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 OTOGQ6ZRI0 2925 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 RGS16O15492 202 aaPredicted RBP9.6□□□□□ -0.87
TTC28-207ENST00000490475 SUSD5O60279 629 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 OR4F21O95013 312 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 OTCP00480 354 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 P04436 131 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 SNRPB2P08579 225 aaKnown RBP9.6□□□□□ -0.87
TTC28-207ENST00000490475 HIST1H1TP22492 207 aaPredicted RBP9.6□□□□□ -0.87
TTC28-207ENST00000490475 ATP5A1P25705 553 aaKnown RBP9.6□□□□□ -0.87
TTC28-207ENST00000490475 PEX19P40855 299 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 BUD31P41223 144 aaPredicted RBP9.6□□□□□ -0.87
TTC28-207ENST00000490475 SSR2P43308 183 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 HNRNPFP52597 415 aaKnown RBP9.6□□□□□ -0.87
TTC28-207ENST00000490475 PPIAP62937 165 aaKnown RBP9.6□□□□□ -0.87
TTC28-207ENST00000490475 PLIN5Q00G26 463 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 CEP85LQ5SZL2 805 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 FRG2Q64ET8 278 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 OR4C11Q6IEV9 310 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 IL20RBQ6UXL0 311 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 MDGA2Q7Z553 956 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 C10orf107Q8IVU9 208 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 CHERPQ8IWX8 916 aaKnown RBP9.6□□□□□ -0.87
TTC28-207ENST00000490475 FAM109AQ8N4B1 249 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 CDYL2Q8N8U2 506 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 ACOT4Q8N9L9 421 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 ACBD4Q8NC06 268 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 TMEM52Q8NDY8 209 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 OR2M7Q8NG81 312 aa9.6□□□□□ -0.87
TTC28-207ENST00000490475 LILRB4Q8NHJ6 448 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms