RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 E2F2Q14209 437 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 SPRED3Q2MJR0 410 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 RNASEH2BQ5TBB1 312 aaKnown RBP7.5□□□□□ -1.21
USP39-216ENST00000490193 PRAMEF9Q5VWM5 478 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 ADNP2Q6IQ32 1131 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 ZNF793Q6ZN11 406 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 UBE3DQ7Z6J8 389 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 ADAMTSL2Q86TH1 951 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 CIARTQ8N365 385 aaPredicted RBP7.5□□□□□ -1.21
USP39-216ENST00000490193 NKAPQ8N5F7 415 aaKnown RBP7.5□□□□□ -1.21
USP39-216ENST00000490193 BBOF1Q8ND07 529 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 ZNF592Q92610 1267 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 PIGTQ969N2 578 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 MAGOHBQ96A72 148 aaKnown RBP7.5□□□□□ -1.21
USP39-216ENST00000490193 RHBDF1Q96CC6 855 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 PTCD3Q96EY7 689 aaKnown RBP7.5□□□□□ -1.21
USP39-216ENST00000490193 ZFP3Q96NJ6 502 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 RUNDC3BQ96NL0 473 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 F2RL3Q96RI0 385 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 SECISBP2Q96T21 854 aaKnown RBP7.5□□□□□ -1.21
USP39-216ENST00000490193 EGFL8Q99944 293 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 MAPKAP1Q9BPZ7 522 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 TBCDQ9BTW9 1192 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 BDH2Q9BUT1 245 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 EFCAB11Q9BUY7 163 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 EPB41L4BQ9H329 900 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 PLAC1Q9HBJ0 212 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 SLC17A6Q9P2U8 582 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 FETUBQ9UGM5 382 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 SPACA6W5XKT8 324 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 MED12LQ86YW9 2145 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 SH3D21A4FU49 640 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 NPEPPSL1A6NEC2 478 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 OR6C76A6NM76 312 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 H7C1Q1 480 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 HRKO00198 91 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 DYRK3O43781 588 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 SMPD2O60906 423 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 SNX4O95219 450 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 CD22P20273 847 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 HIST1H1TP22492 207 aaPredicted RBP7.49□□□□□ -1.21
USP39-216ENST00000490193 PCSK6P29122 969 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 CXCR5P32302 372 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 PCYT1AP49585 367 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 SLC37A1P57057 533 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 PLIN5Q00G26 463 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 ID2Q02363 134 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 FRG1Q14331 258 aaKnown RBP7.49□□□□□ -1.21
USP39-216ENST00000490193 EBPQ15125 230 aaKnown RBP7.49□□□□□ -1.21
USP39-216ENST00000490193 RPS6KA2Q15349 733 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 TGFBIQ15582 683 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 TSNQ15631 228 aaKnown RBP7.49□□□□□ -1.21
USP39-216ENST00000490193 C18orf21Q32NC0 220 aaPredicted RBP7.49□□□□□ -1.21
USP39-216ENST00000490193 TMEM35AQ53FP2 167 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 CDKL4Q5MAI5 379 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 FNDC7Q5VTL7 733 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 CCDC137Q6PK04 289 aaKnown RBP7.49□□□□□ -1.21
USP39-216ENST00000490193 DGAT2L6Q6ZPD8 337 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 SLC29A4Q7RTT9 530 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 ADGRE4PQ86SQ3 457 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 P3H2Q8IVL5 708 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 ST13P4Q8IZP2 240 aaPredicted RBP7.49□□□□□ -1.21
USP39-216ENST00000490193 TCAIMQ8N3R3 496 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 ZNF441Q8N8Z8 693 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 ACOT4Q8N9L9 421 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 FAM13CQ8NE31 585 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 TRIM58Q8NG06 486 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 ZPLD1Q8TCW7 415 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 WDYHV1Q96HA8 205 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 DGAT2Q96PD7 388 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 UCN2Q96RP3 112 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 TRIB1Q96RU8 372 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 PELOQ9BRX2 385 aaKnown RBP7.49□□□□□ -1.21
USP39-216ENST00000490193 TMEM79Q9BSE2 394 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 SFXN3Q9BWM7 321 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 RBM24Q9BX46 236 aaKnown RBP7.49□□□□□ -1.21
USP39-216ENST00000490193 MS4A8Q9BY19 250 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 UGT2B28Q9BY64 529 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 ANGPTL4Q9BY76 406 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 WWTR1Q9GZV5 400 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 DNAJC11Q9NVH1 559 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 MS4A12Q9NXJ0 267 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 GALNT8Q9NY28 637 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 ADAM21Q9UKJ8 722 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 C15orf41Q9Y2V0 281 aa7.49□□□□□ -1.21
USP39-216ENST00000490193 CHD3Q12873 2000 aaKnown RBP7.49□□□□□ -1.21
USP39-216ENST00000490193 CAPN14A8MX76 684 aa7.48□□□□□ -1.21
USP39-216ENST00000490193 CES2O00748 559 aa7.48□□□□□ -1.21
USP39-216ENST00000490193 TP53I11O14683 189 aa7.48□□□□□ -1.21
USP39-216ENST00000490193 CLGNO14967 610 aa7.48□□□□□ -1.21
USP39-216ENST00000490193 TAPBPO15533 448 aa7.48□□□□□ -1.21
USP39-216ENST00000490193 DSCAMO60469 2012 aa7.48□□□□□ -1.21
USP39-216ENST00000490193 ERN1O75460 977 aaKnown RBP7.48□□□□□ -1.21
USP39-216ENST00000490193 RCBTB2O95199 551 aa7.48□□□□□ -1.21
USP39-216ENST00000490193 ACTL6AO96019 429 aa7.48□□□□□ -1.21
USP39-216ENST00000490193 TMIGD3P0DMS9 266 aaPredicted RBP7.48□□□□□ -1.21
USP39-216ENST00000490193 CPN1P15169 458 aa7.48□□□□□ -1.21
USP39-216ENST00000490193 ALOX15P16050 662 aaPredicted RBP7.48□□□□□ -1.21
USP39-216ENST00000490193 BMP7P18075 431 aa7.48□□□□□ -1.21
USP39-216ENST00000490193 CPN2P22792 545 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms