RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 BMP8BP34820 402 aa15.2■□□□□ 0.02
SNX5-214ENST00000490175 GGT2P36268 569 aa15.2■□□□□ 0.02
SNX5-214ENST00000490175 RABIFP47224 123 aa15.2■□□□□ 0.02
SNX5-214ENST00000490175 ILF3Q12906 894 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNX5-214ENST00000490175 GNA13Q14344 377 aa15.2■□□□□ 0.02
SNX5-214ENST00000490175 PUM1Q14671 1186 aaKnown RBP eCLIP15.2■□□□□ 0.022e-7■■■□□ 17
SNX5-214ENST00000490175 CEBPEQ15744 281 aa15.2■□□□□ 0.02
SNX5-214ENST00000490175 RPS26P11Q5JNZ5 115 aaPredicted RBP15.2■□□□□ 0.02
SNX5-214ENST00000490175 ASPGQ86U10 573 aa15.2■□□□□ 0.02
SNX5-214ENST00000490175 PARP8Q8N3A8 854 aa15.2■□□□□ 0.02
SNX5-214ENST00000490175 OR56A1Q8NGH5 318 aa15.2■□□□□ 0.02
SNX5-214ENST00000490175 OR52J3Q8NH60 311 aa15.2■□□□□ 0.02
SNX5-214ENST00000490175 FLVCR1-AS1Q8TAF5 88 aa15.2■□□□□ 0.02
SNX5-214ENST00000490175 PHF10Q8WUB8 498 aaKnown RBP15.2■□□□□ 0.02
SNX5-214ENST00000490175 IPCEF1Q8WWN9 437 aaPredicted RBP15.2■□□□□ 0.02
SNX5-214ENST00000490175 PNMA8BQ9ULN7 279 aaPredicted RBP15.2■□□□□ 0.02
SNX5-214ENST00000490175 KLHL20Q9Y2M5 609 aa15.2■□□□□ 0.02
SNX5-214ENST00000490175 PCDHGA6Q9Y5G7 932 aa15.2■□□□□ 0.02
SNX5-214ENST00000490175 PRAMEF26H0Y7S4 382 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 J3KTA2 159 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 PGRMC2O15173 223 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 SLC28A2O43868 658 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 CBFA2T3O75081 653 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 ERAL1O75616 437 aaKnown RBP15.19■□□□□ 0.02
SNX5-214ENST00000490175 CCNB2O95067 398 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 IGLV3-19P01714 112 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 CSNK2A2P19784 350 aaPredicted RBP15.19■□□□□ 0.02
SNX5-214ENST00000490175 MATN1P21941 496 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 KCNJ5P48544 419 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 CYP27C1Q4G0S4 372 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 PRRT3Q5FWE3 981 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 COLEC12Q5KU26 742 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 Q6ZSR6 202 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 VN1R4Q7Z5H5 301 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 ABI3BPQ7Z7G0 1075 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 KRT73Q86Y46 540 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 NRROSQ86YC3 692 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 CCDC71Q8IV32 467 aaPredicted RBP15.19■□□□□ 0.02
SNX5-214ENST00000490175 SLC44A2Q8IWA5 706 aaPredicted RBP15.19■□□□□ 0.02
SNX5-214ENST00000490175 FAM3CQ92520 227 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 ZNF354BQ96LW1 612 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 TREX2Q9BQ50 279 aaPredicted RBP15.19■□□□□ 0.02
SNX5-214ENST00000490175 FBXW2Q9UKT8 454 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 PSME2Q9UL46 239 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 GPC6Q9Y625 555 aaPredicted RBP15.19■□□□□ 0.02
SNX5-214ENST00000490175 GLOD5A6NK44 160 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 MAGEB3O15480 346 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 NDUFS2O75306 463 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 FHP07954 510 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 SLC35G6P0C7Q6 338 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 OR12D1P0DN82 309 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 IMPDH2P12268 514 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 CD72P21854 359 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 MPIP34949 423 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 CCR5P51681 352 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 RAB8AP61006 207 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 TEKQ02763 1124 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 RELAQ04206 551 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 MOGQ16653 247 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 GPR153Q6NV75 609 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 RBM12BQ8IXT5 1001 aaKnown RBP15.19■□□□□ 0.02
SNX5-214ENST00000490175 ENTHD1Q8IYW4 607 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 GPR32P1Q8NGA4 272 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 BBS10Q8TAM1 723 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 SUN3Q8TAQ9 357 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 TBC1D15Q8TC07 691 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 HMGB4Q8WW32 186 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 CNRIP1Q96F85 164 aaPredicted RBP15.19■□□□□ 0.02
SNX5-214ENST00000490175 OR2A14Q96R47 310 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 SPATA5L1Q9BVQ7 753 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 CCDC90BQ9GZT6 254 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 SYNPO2LQ9H987 977 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 BCL2L10Q9HD36 194 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 SEC14L3Q9UDX4 400 aa15.19■□□□□ 0.02
SNX5-214ENST00000490175 A0A1W2PPW3 197 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 PCDHGA12O60330 932 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 PRKRAO75569 313 aaKnown RBP15.18■□□□□ 0.02
SNX5-214ENST00000490175 TNFP01375 233 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 NR2F1P10589 423 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 ZNF12P17014 697 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 CCNA2P20248 432 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 CBLP22681 906 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 CRISP3P54108 245 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 C21orf59P57076 290 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 PRR5P85299 388 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 MVKQ03426 396 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 EMX1Q04741 257 aaPredicted RBP15.18■□□□□ 0.02
SNX5-214ENST00000490175 PIGFQ07326 219 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 NPTX1Q15818 432 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 PRAMEF8Q5VWM4 474 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 MLIPQ5VWP3 458 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 PRAMEF7Q5VXH5 474 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 C18orf63Q68DL7 685 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 SZRD1Q7Z422 152 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 TRIM48Q8IWZ4 208 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 TAGAPQ8N103 731 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 DEPDC4Q8N2C3 294 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 SVOPQ8N4V2 548 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 GPBAR1Q8TDU6 330 aa15.18■□□□□ 0.02
SNX5-214ENST00000490175 XAGE5Q8WWM1 108 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms