RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 SOAT1P35610 550 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 FKBP1BP68106 108 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 ARF5P84085 180 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 WASHC5Q12768 1159 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 KIAA0040Q15053 153 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 PPP1R3AQ16821 1122 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 GLRA4Q5JXX5 417 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 C9orf129Q5T035 196 aaKnown RBP2.26□□□□□ -2.05
NF1-213ENST00000489712 MPP7Q5T2T1 576 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 CASC4Q6P4E1 433 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 CNSTQ6PJW8 725 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 OTOAQ7RTW8 1153 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 GLRX5Q86SX6 157 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 CNPY4Q8N129 248 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 ATAD1Q8NBU5 361 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 KIAA0895Q8NCT3 520 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 SAP25Q8TEE9 199 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 CKAP2Q8WWK9 683 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 TCP11Q8WWU5 503 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 MAGEB18Q96M61 343 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 ERGIC2Q96RQ1 377 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 INTS14Q96SY0 518 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 ELL3Q9HB65 397 aaPredicted RBP2.26□□□□□ -2.05
NF1-213ENST00000489712 IL1RAPL2Q9NP60 686 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 DNAJB9Q9UBS3 223 aa2.26□□□□□ -2.05
NF1-213ENST00000489712 LEF1Q9UJU2 399 aaPredicted RBP2.26□□□□□ -2.05
NF1-213ENST00000489712 TDRD6O60522 2096 aaKnown RBP2.26□□□□□ -2.05
NF1-213ENST00000489712 M0R296 226 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 SLC33A1O00400 549 aaPredicted RBP2.25□□□□□ -2.05
NF1-213ENST00000489712 SAP18O00422 153 aaKnown RBP2.25□□□□□ -2.05
NF1-213ENST00000489712 KIAA0513O60268 411 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 B3GALNT1O75752 331 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 LYPD3O95274 346 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 RLN1P04808 185 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 CCDC159P0C7I6 412 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 PGAM2P15259 253 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 DESP17661 470 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 NT5C2P49902 561 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 STX1BP61266 288 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 RPL27P61353 136 aaKnown RBP2.25□□□□□ -2.05
NF1-213ENST00000489712 CBX3Q13185 183 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 ISXQ2M1V0 245 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 TYSND1Q2T9J0 566 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 ANKRD20A4Q4UJ75 823 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 ANKRD20A8PQ5CZ79 823 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 ANKRD20A2Q5SQ80 823 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 ANKRD20A1Q5TYW2 823 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 ANKRD20A3Q5VUR7 823 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 AGAP6Q5VW22 663 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 PLBD1Q6P4A8 553 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 LINC00696Q6ZRV3 163 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 CATSPER4Q7RTX7 472 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 SPATA19Q7Z5L4 167 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 ADGRD2Q7Z7M1 963 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 SYCP3Q8IZU3 236 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 GVQW1Q8N7I0 195 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 ANKRD20A12PQ8NF67 263 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 U2AF1L4Q8WU68 220 aaKnown RBP2.25□□□□□ -2.05
NF1-213ENST00000489712 KRT35Q92764 455 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 DNASE1L2Q92874 299 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 PTP4A1Q93096 173 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 MR1Q95460 341 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 SNX21Q969T3 373 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 FAF2Q96CS3 445 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 SGF29Q96ES7 293 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 CABS1Q96KC9 395 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 ZNF285Q96NJ3 590 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 RAB40CQ96S21 281 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 C17orf62Q9BQA9 187 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 MLPHQ9BV36 600 aaPredicted RBP2.25□□□□□ -2.05
NF1-213ENST00000489712 UTP14AQ9BVJ6 771 aaKnown RBP2.25□□□□□ -2.05
NF1-213ENST00000489712 LRRC2Q9BYS8 371 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 SLC5A7Q9GZV3 580 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 LSG1Q9H089 658 aaKnown RBP2.25□□□□□ -2.05
NF1-213ENST00000489712 ZNF446Q9NWS9 450 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 VPS18Q9P253 973 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 RCOR3Q9P2K3 495 aaPredicted RBP2.25□□□□□ -2.05
NF1-213ENST00000489712 EIF3KQ9UBQ5 218 aaKnown RBP2.25□□□□□ -2.05
NF1-213ENST00000489712 HOOK1Q9UJC3 728 aaKnown RBP2.25□□□□□ -2.05
NF1-213ENST00000489712 CDH7Q9ULB5 785 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 LIPT1Q9Y234 373 aa2.25□□□□□ -2.05
NF1-213ENST00000489712 ABCC9O60706 1549 aa2.24□□□□□ -2.05
NF1-213ENST00000489712 A4D1N5 150 aa2.24□□□□□ -2.05
NF1-213ENST00000489712 OOEPA6NGQ2 149 aa2.24□□□□□ -2.05
NF1-213ENST00000489712 CCDC69A6NI79 296 aa2.24□□□□□ -2.05
NF1-213ENST00000489712 CCT8L1PA6NM43 557 aa2.24□□□□□ -2.05
NF1-213ENST00000489712 YDJCA8MPS7 323 aa2.24□□□□□ -2.05
NF1-213ENST00000489712 CTDSPLO15194 276 aa2.24□□□□□ -2.05
NF1-213ENST00000489712 ZBTB14O43829 449 aa2.24□□□□□ -2.05
NF1-213ENST00000489712 CSO75390 466 aaKnown RBP2.24□□□□□ -2.05
NF1-213ENST00000489712 CRCPO75575 148 aa2.24□□□□□ -2.05
NF1-213ENST00000489712 ANXA9O76027 345 aa2.24□□□□□ -2.05
NF1-213ENST00000489712 SIX3O95343 332 aaPredicted RBP2.24□□□□□ -2.05
NF1-213ENST00000489712 APBB3O95704 486 aa2.24□□□□□ -2.05
NF1-213ENST00000489712 MMP10P09238 476 aa2.24□□□□□ -2.05
NF1-213ENST00000489712 P0C879 139 aa2.24□□□□□ -2.05
NF1-213ENST00000489712 GJB2P29033 226 aa2.24□□□□□ -2.05
NF1-213ENST00000489712 NDST1P52848 882 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms