RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 HSPB3Q12988 150 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 FLOT2Q14254 428 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 PRAMEF17Q5VTA0 474 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 LCN8Q6JVE9 175 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 PWWP2BQ6NUJ5 590 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 TMEM126BQ8IUX1 230 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 CCDC116Q8IYX3 515 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 SHISA5Q8N114 240 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 FAM156AQ8NDB6 213 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 OR2T12Q8NG77 320 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 OR52N2Q8NGI0 321 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 OR10A6Q8NH74 314 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 ZNF675Q8TD23 568 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 JADE3Q92613 823 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 FAM120BQ96EK7 910 aaKnown RBP13.3□□□□□ -0.28
VPS26A-205ENST00000489656 LIN37Q96GY3 246 aaPredicted RBP13.3□□□□□ -0.28
VPS26A-205ENST00000489656 REXO5Q96IC2 774 aaKnown RBP13.3□□□□□ -0.28
VPS26A-205ENST00000489656 STRADBQ9C0K7 418 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 LANCL2Q9NS86 450 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 AKAP7Q9P0M2 348 aaPredicted RBP13.3□□□□□ -0.28
VPS26A-205ENST00000489656 ACTR3BQ9P1U1 418 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 GMPR2Q9P2T1 348 aaKnown RBP13.3□□□□□ -0.28
VPS26A-205ENST00000489656 MMACHCQ9Y4U1 282 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 SNX13Q9Y5W8 968 aa13.3□□□□□ -0.28
VPS26A-205ENST00000489656 RNF103-CHMP3A0A140T963 221 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 A0A1W2PS29 197 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 PLOD2O00469 737 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 CLDN4O14493 209 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 POLR1CO15160 346 aaPredicted RBP13.29□□□□□ -0.28
VPS26A-205ENST00000489656 TIAF1O95411 115 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 SLC35E2P0CK97 266 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 C8orf89P0DMQ9 161 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 BMP2P12643 396 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 TCN1P20061 433 aaPredicted RBP13.29□□□□□ -0.28
VPS26A-205ENST00000489656 GPC1P35052 558 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 SOAT1P35610 550 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 CHI3L1P36222 383 aaPredicted RBP13.29□□□□□ -0.28
VPS26A-205ENST00000489656 OR1D4P47884 311 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 CCT3P49368 545 aaKnown RBP13.29□□□□□ -0.28
VPS26A-205ENST00000489656 OR4D2P58180 307 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 CCNIQ14094 377 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 RGNQ15493 299 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 TRIP6Q15654 476 aaKnown RBP13.29□□□□□ -0.28
VPS26A-205ENST00000489656 SYT16Q17RD7 645 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 ZNF750Q32MQ0 723 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 ZNF385CQ66K41 422 aaPredicted RBP13.29□□□□□ -0.28
VPS26A-205ENST00000489656 ERICH5Q6P6B1 374 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 C10orf67Q8IYJ2 551 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 MICU2Q8IYU8 434 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 C10orf111Q8N326 155 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 METTL27Q8N6F8 245 aaPredicted RBP13.29□□□□□ -0.28
VPS26A-205ENST00000489656 CMKLR1Q99788 373 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 TGIF2Q9GZN2 237 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 MKKSQ9NPJ1 570 aaPredicted RBP13.29□□□□□ -0.28
VPS26A-205ENST00000489656 PRTFDC1Q9NRG1 225 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 GPATCH2Q9NW75 528 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 MAGEL2Q9UJ55 1249 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 CLDN16Q9Y5I7 305 aa13.29□□□□□ -0.28
VPS26A-205ENST00000489656 KNTC1P50748 2209 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 IGLV3-12A0A075B6K2 115 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 ELOVL7A1L3X0 281 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 SYNDIG1LA6NDD5 238 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 EMC8O43402 210 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 B4GALT2O60909 372 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 LDB3O75112 727 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 ENTPD5O75356 428 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 KCNK5O95279 499 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 STAMBPO95630 424 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 C1QCP02747 245 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 GALNSP34059 522 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 RORAP35398 523 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 MSX2P35548 267 aaPredicted RBP13.28□□□□□ -0.28
VPS26A-205ENST00000489656 TXNL4AP83876 142 aaKnown RBP13.28□□□□□ -0.28
VPS26A-205ENST00000489656 PRR5P85299 388 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 ISXQ2M1V0 245 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 ZNF628Q5EBL2 1059 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 ARHGAP40Q5TG30 622 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 BHLHB9Q6PI77 547 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 QSOX2Q6ZRP7 698 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 C6orf120Q7Z4R8 191 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 IFNEQ86WN2 208 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 DHFR2Q86XF0 187 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 PROSER1Q86XN7 944 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 ZC3H7AQ8IWR0 971 aaKnown RBP13.28□□□□□ -0.28
VPS26A-205ENST00000489656 OR4N5Q8IXE1 308 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 ST13P4Q8IZP2 240 aaPredicted RBP13.28□□□□□ -0.28
VPS26A-205ENST00000489656 CLEC4FQ8N1N0 589 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 GOLM1Q8NBJ4 401 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 OR56A1Q8NGH5 318 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 OR52E4Q8NGH9 312 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 OR9A2Q8NGT5 310 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.28□□□□□ -0.28
VPS26A-205ENST00000489656 COL26A1Q96A83 441 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 ELP4Q96EB1 424 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 LRFN5Q96NI6 719 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 PELOQ9BRX2 385 aaKnown RBP13.28□□□□□ -0.28
VPS26A-205ENST00000489656 SLC7A5P2Q9GIP4 190 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 PCDHAC1Q9H158 963 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 C3orf14Q9HBI5 128 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 APMAPQ9HDC9 416 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms