RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 SMTNL1A8MU46 457 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.31□□□□□ -1.08
SSBP1-212ENST00000489378 C16orf97H3BN30 126 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 CYR61O00622 381 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 CTNSO60931 367 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 ZNF189O75820 626 aaPredicted RBP8.31□□□□□ -1.08
SSBP1-212ENST00000489378 TGM6O95932 706 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 IGHV4-39P01824 125 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 POU2F1P14859 743 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 CPN1P15169 458 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 SRD5A1P18405 259 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 SAT1P21673 171 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 CCND1P24385 295 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 HADHBP55084 474 aaKnown RBP8.31□□□□□ -1.08
SSBP1-212ENST00000489378 MTTPP55157 894 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 SESN2P58004 480 aaPredicted RBP8.31□□□□□ -1.08
SSBP1-212ENST00000489378 ID2Q02363 134 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 GAB1Q13480 694 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 PDLIM3Q53GG5 364 aaPredicted RBP8.31□□□□□ -1.08
SSBP1-212ENST00000489378 BEX5Q5H9J7 111 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 MRNIPQ6NTE8 343 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 C12orf54Q6X4T0 127 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 CENPUQ71F23 418 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.31□□□□□ -1.08
SSBP1-212ENST00000489378 YRDCQ86U90 279 aaKnown RBP8.31□□□□□ -1.08
SSBP1-212ENST00000489378 CPNE9Q8IYJ1 553 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 TBC1D19Q8N5T2 526 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 NUBPLQ8TB37 319 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 AKAP1Q92667 903 aaKnown RBP eCLIP8.31□□□□□ -1.08
SSBP1-212ENST00000489378 DIO2Q92813 273 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 IQCDQ96DY2 449 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 TRMT61AQ96FX7 289 aaKnown RBP8.31□□□□□ -1.08
SSBP1-212ENST00000489378 QRFPRQ96P65 431 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 BPIFA3Q9BQP9 254 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 HAUS8Q9BT25 410 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 KRTAP9-2Q9BYQ4 174 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 PHACTR1Q9C0D0 580 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 ACBD3Q9H3P7 528 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 LMBRD1Q9NUN5 540 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 COPS7AQ9UBW8 275 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 TFR2Q9UP52 801 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 TMA7Q9Y2S6 64 aaKnown RBP8.31□□□□□ -1.08
SSBP1-212ENST00000489378 IKBKGQ9Y6K9 419 aa8.31□□□□□ -1.08
SSBP1-212ENST00000489378 IGHV4-30-2A0A087WSY4 118 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 ANKRD33BA6NCL7 494 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 E7EVH7 732 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 HRKO00198 91 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 LDB3O75112 727 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 TJP3O95049 919 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 PGRP06401 933 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 SERPINA6P08185 405 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 SOD3P08294 240 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 ENO3P13929 434 aaPredicted RBP8.3□□□□□ -1.08
SSBP1-212ENST00000489378 SERPINB3P29508 390 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 HNRNPH1P31943 449 aaKnown RBP8.3□□□□□ -1.08
SSBP1-212ENST00000489378 CTNNA1P35221 906 aaKnown RBP8.3□□□□□ -1.08
SSBP1-212ENST00000489378 CASP9P55211 416 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 EEF1A1P68104 462 aaKnown RBP8.3□□□□□ -1.08
SSBP1-212ENST00000489378 REEP5Q00765 189 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 STX4Q12846 297 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 CTBP1Q13363 440 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 RBBP5Q15291 538 aaKnown RBP8.3□□□□□ -1.08
SSBP1-212ENST00000489378 EEF1A1P5Q5VTE0 462 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 ZNF549Q6P9A3 640 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 TMEM64Q6YI46 380 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 PRUNE1Q86TP1 453 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 MEX3DQ86XN8 651 aaKnown RBP8.3□□□□□ -1.08
SSBP1-212ENST00000489378 SLC15A4Q8N697 577 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 CNEP1R1Q8N9A8 125 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 FAM83FQ8NEG4 500 aaPredicted RBP8.3□□□□□ -1.08
SSBP1-212ENST00000489378 TRPV3Q8NET8 790 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 SLC35B2Q8TB61 432 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 DOK4Q8TEW6 326 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 ATL1Q8WXF7 558 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 UCN3Q969E3 161 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 NEIL2Q969S2 332 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 MFSD3Q96ES6 412 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 PGM2Q96G03 612 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 RILPQ96NA2 401 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 TSNARE1Q96NA8 513 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 TCF12Q99081 682 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 GPR21Q99679 349 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 TMEM204Q9BSN7 226 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 NPLQ9BXD5 320 aaPredicted RBP8.3□□□□□ -1.08
SSBP1-212ENST00000489378 NAT10Q9H0A0 1025 aaKnown RBP8.3□□□□□ -1.08
SSBP1-212ENST00000489378 ESRP2Q9H6T0 727 aaKnown RBP8.3□□□□□ -1.08
SSBP1-212ENST00000489378 L2HGDHQ9H9P8 463 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 KLHL42Q9P2K6 505 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 MAPRE3Q9UPY8 281 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 MRPS33Q9Y291 106 aaKnown RBP8.3□□□□□ -1.08
SSBP1-212ENST00000489378 CADP27708 2225 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 TRRAPQ9Y4A5 3859 aa8.3□□□□□ -1.08
SSBP1-212ENST00000489378 FRG2CA6NGY1 282 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 EIF3FO00303 357 aaPredicted RBP8.29□□□□□ -1.08
SSBP1-212ENST00000489378 ERI3O43414 337 aaKnown RBP8.29□□□□□ -1.08
SSBP1-212ENST00000489378 DYRK3O43781 588 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 B3GALT2O43825 422 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 ACTL6AO96019 429 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 IGKV3-11P04433 115 aa8.29□□□□□ -1.08
SSBP1-212ENST00000489378 PTPN6P29350 595 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms