RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 COMMD6Q7Z4G1 85 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 DOLPP1Q86YN1 238 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 GPALPP1Q8IXQ4 340 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 ST13P4Q8IZP2 240 aaPredicted RBP12.96□□□□□ -0.33
VTI1A-206ENST00000489142 METTL4Q8N3J2 472 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 OR5L2Q8NGL0 311 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 OR8K3Q8NH51 312 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 C16orf52Q8NHV5 167 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 MZB1Q8WU39 189 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 TTTY12Q9BZ98 90 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 WDR41Q9HAD4 459 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 PSD3Q9NYI0 1048 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 MEMO1Q9Y316 297 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 EXPH5Q8NEV8 1989 aa12.96□□□□□ -0.34
VTI1A-206ENST00000489142 MANBAO00462 879 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 TPOP07202 933 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 SNRPB2P08579 225 aaKnown RBP12.95□□□□□ -0.34
VTI1A-206ENST00000489142 CT62P0C5K7 136 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 CHN1P15882 459 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 PIK3R1P27986 724 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 PIGAP37287 484 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 MAPK12P53778 367 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 SLC37A1P57057 533 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 SPRED3Q2MJR0 410 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 PIGGQ5H8A4 983 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 OPN5Q6U736 354 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 TMEM64Q6YI46 380 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 FAM47EQ6ZV65 393 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 CD163Q86VB7 1156 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 OR5M3Q8NGP4 307 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 NUBPLQ8TB37 319 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 UBLCP1Q8WVY7 318 aaPredicted RBP12.95□□□□□ -0.34
VTI1A-206ENST00000489142 ART5Q96L15 291 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 KCNA7Q96RP8 456 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 C1QTNF3Q9BXJ4 246 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 WWTR1Q9GZV5 400 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 TRPS1Q9UHF7 1281 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 PPT2Q9UMR5 302 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 SNX6Q9UNH7 406 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 LIPGQ9Y5X9 500 aa12.95□□□□□ -0.34
VTI1A-206ENST00000489142 DNAJC13O75165 2243 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 CACNA1CQ13936 2221 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 NOTCH2Q04721 2471 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 NINQ8N4C6 2090 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 P04436 131 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 CELA3AP09093 270 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 SLC35E2P0CK97 266 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 ATP5F1P24539 256 aaPredicted RBP12.94□□□□□ -0.34
VTI1A-206ENST00000489142 PTGS2P35354 604 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 HTR6P50406 440 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 XKP51811 444 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 TBL3Q12788 808 aaKnown RBP12.94□□□□□ -0.34
VTI1A-206ENST00000489142 MPEG1Q2M385 716 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 PRAMEF20Q5VT98 475 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 SP5Q6BEB4 398 aaPredicted RBP12.94□□□□□ -0.34
VTI1A-206ENST00000489142 LYPD8Q6UX82 237 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 GPRIN3Q6ZVF9 776 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 SLC29A4Q7RTT9 530 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 PAGE2Q7Z2X7 111 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 ZNF808Q8N4W9 903 aaPredicted RBP12.94□□□□□ -0.34
VTI1A-206ENST00000489142 C1orf52Q8N6N3 182 aaKnown RBP12.94□□□□□ -0.34
VTI1A-206ENST00000489142 FAM13CQ8NE31 585 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 SLC22A8Q8TCC7 542 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 MARVELD3Q96A59 401 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 PELOQ9BRX2 385 aaKnown RBP12.94□□□□□ -0.34
VTI1A-206ENST00000489142 C12orf65Q9H3J6 166 aaKnown RBP12.94□□□□□ -0.34
VTI1A-206ENST00000489142 CXorf21Q9HAI6 301 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 SACM1LQ9NTJ5 587 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 TUBA8Q9NY65 449 aaPredicted RBP12.94□□□□□ -0.34
VTI1A-206ENST00000489142 AHSPQ9NZD4 102 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 TNFRSF10DQ9UBN6 386 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 ADAM29Q9UKF5 820 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 EMCNQ9ULC0 261 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 HRH3Q9Y5N1 445 aa12.94□□□□□ -0.34
VTI1A-206ENST00000489142 PRRG2O14669 202 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 ADAM10O14672 748 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 PRF1P14222 555 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 IMPDH1P20839 514 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 CNR1P21554 472 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 NT5EP21589 574 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 HTR1EP28566 365 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 FEN1P39748 380 aaKnown RBP12.93□□□□□ -0.34
VTI1A-206ENST00000489142 MAGEA5P43359 124 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 ALDH9A1P49189 494 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 PRKAA2P54646 552 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 DUSP2Q05923 314 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 BIKQ13323 160 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 EBPQ15125 230 aaKnown RBP12.93□□□□□ -0.34
VTI1A-206ENST00000489142 RASA2Q15283 850 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 ZNF791Q3KP31 576 aaPredicted RBP12.93□□□□□ -0.34
VTI1A-206ENST00000489142 MTFR2Q6P444 385 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 SCIMPQ6UWF3 145 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 RPTNQ6XPR3 784 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 GK5Q6ZS86 529 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 GALNT12Q8IXK2 581 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 RPRMLQ8N4K4 120 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 CCNYL1Q8N7R7 359 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 GOLM1Q8NBJ4 401 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 OR10G3Q8NGC4 313 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 OR4K14Q8NGD5 310 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms