RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 G3V2L1 256 aa23.12■■□□□ 1.29
HMGN1-217ENST00000489072 NADKO95544 446 aaPredicted RBP23.12■■□□□ 1.29
HMGN1-217ENST00000489072 CLPSP04118 112 aa23.12■■□□□ 1.29
HMGN1-217ENST00000489072 GALNSP34059 522 aa23.12■■□□□ 1.29
HMGN1-217ENST00000489072 PTGER1P34995 402 aa23.12■■□□□ 1.29
HMGN1-217ENST00000489072 MPEG1Q2M385 716 aa23.12■■□□□ 1.29
HMGN1-217ENST00000489072 Q6ZPB1 254 aaPredicted RBP23.12■■□□□ 1.29
HMGN1-217ENST00000489072 FGD2Q7Z6J4 655 aa23.12■■□□□ 1.29
HMGN1-217ENST00000489072 TDRPQ86YL5 185 aa23.12■■□□□ 1.29
HMGN1-217ENST00000489072 SPPL2CQ8IUH8 684 aa23.12■■□□□ 1.29
HMGN1-217ENST00000489072 MMP21Q8N119 569 aa23.12■■□□□ 1.29
HMGN1-217ENST00000489072 CNPY4Q8N129 248 aa23.12■■□□□ 1.29
HMGN1-217ENST00000489072 GHDCQ8N2G8 530 aa23.12■■□□□ 1.29
HMGN1-217ENST00000489072 C16orf52Q8NHV5 167 aa23.12■■□□□ 1.29
HMGN1-217ENST00000489072 EPS8L3Q8TE67 593 aaKnown RBP23.12■■□□□ 1.29
HMGN1-217ENST00000489072 CCDC120Q96HB5 630 aa23.12■■□□□ 1.29
HMGN1-217ENST00000489072 NCOA6Q14686 2063 aaPredicted RBP23.12■■□□□ 1.29
HMGN1-217ENST00000489072 SMIM23A6NLE4 172 aa23.11■■□□□ 1.29
HMGN1-217ENST00000489072 TFECO14948 347 aaPredicted RBP23.11■■□□□ 1.29
HMGN1-217ENST00000489072 CHN1P15882 459 aa23.11■■□□□ 1.29
HMGN1-217ENST00000489072 PIK3R1P27986 724 aa23.11■■□□□ 1.29
HMGN1-217ENST00000489072 HTR6P50406 440 aa23.11■■□□□ 1.29
HMGN1-217ENST00000489072 MAPK12P53778 367 aa23.11■■□□□ 1.29
HMGN1-217ENST00000489072 SLC37A1P57057 533 aa23.11■■□□□ 1.29
HMGN1-217ENST00000489072 RTL4Q6ZR62 310 aa23.11■■□□□ 1.29
HMGN1-217ENST00000489072 C1orf52Q8N6N3 182 aaKnown RBP23.11■■□□□ 1.29
HMGN1-217ENST00000489072 GSTO2Q9H4Y5 243 aa23.11■■□□□ 1.29
HMGN1-217ENST00000489072 CXorf21Q9HAI6 301 aa23.11■■□□□ 1.29
HMGN1-217ENST00000489072 CACNA1DQ01668 2161 aa23.11■■□□□ 1.29
HMGN1-217ENST00000489072 G3V3Y1 287 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 HS6ST1O60243 411 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 GLRA3O75311 464 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 KRT6AP02538 564 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 PROCP04070 461 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 KRT6BP04259 564 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 KRT6CP48668 564 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 LCP2Q13094 533 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 CMPK2Q5EBM0 449 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 ZNF787Q6DD87 383 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 OPN5Q6U736 354 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 LYPD8Q6UX82 237 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 ZYG11AQ6WRX3 759 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 RNF111Q6ZNA4 994 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 OR2M7Q8NG81 312 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 OR4K14Q8NGD5 310 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 METTL6Q8TCB7 284 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 ITLN2Q8WWU7 325 aaPredicted RBP23.1■■□□□ 1.29
HMGN1-217ENST00000489072 TM4SF18Q96CE8 201 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.1■■□□□ 1.29
HMGN1-217ENST00000489072 VPS29Q9UBQ0 182 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 CES1P1Q9UKY3 287 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 PCDHA9Q9Y5H5 950 aa23.1■■□□□ 1.29
HMGN1-217ENST00000489072 CT62P0C5K7 136 aa23.09■■□□□ 1.29
HMGN1-217ENST00000489072 HSD3B1P14060 373 aa23.09■■□□□ 1.29
HMGN1-217ENST00000489072 KRT15P19012 456 aa23.09■■□□□ 1.29
HMGN1-217ENST00000489072 HSD3B2P26439 372 aa23.09■■□□□ 1.29
HMGN1-217ENST00000489072 SSTR4P31391 388 aa23.09■■□□□ 1.29
HMGN1-217ENST00000489072 XKP51811 444 aa23.09■■□□□ 1.29
HMGN1-217ENST00000489072 NR0B1P51843 470 aaKnown RBP23.09■■□□□ 1.29
HMGN1-217ENST00000489072 CASP6P55212 293 aa23.09■■□□□ 1.29
HMGN1-217ENST00000489072 CSTF3Q12996 717 aaKnown RBP23.09■■□□□ 1.29
HMGN1-217ENST00000489072 EBPQ15125 230 aaKnown RBP23.09■■□□□ 1.29
HMGN1-217ENST00000489072 GOLM1Q8NBJ4 401 aa23.09■■□□□ 1.29
HMGN1-217ENST00000489072 CHTF18Q8WVB6 975 aa23.09■■□□□ 1.29
HMGN1-217ENST00000489072 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.09■■□□□ 1.29
HMGN1-217ENST00000489072 GAL3ST4Q96RP7 486 aa23.09■■□□□ 1.29
HMGN1-217ENST00000489072 KCNA7Q96RP8 456 aa23.09■■□□□ 1.29
HMGN1-217ENST00000489072 ACPTQ9BZG2 426 aa23.09■■□□□ 1.29
HMGN1-217ENST00000489072 WWTR1Q9GZV5 400 aa23.09■■□□□ 1.29
HMGN1-217ENST00000489072 C12orf65Q9H3J6 166 aaKnown RBP23.09■■□□□ 1.29
HMGN1-217ENST00000489072 PPCSQ9HAB8 311 aa23.09■■□□□ 1.29
HMGN1-217ENST00000489072 NMRK1Q9NWW6 199 aa23.09■■□□□ 1.29
HMGN1-217ENST00000489072 SUCOQ9UBS9 1254 aaKnown RBP23.09■■□□□ 1.29
HMGN1-217ENST00000489072 UBFD1O14562 309 aaKnown RBP23.08■■□□□ 1.29
HMGN1-217ENST00000489072 CCL3P10147 92 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 MYL2P10916 166 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 CPMP14384 443 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 HMOX2P30519 316 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 DCTP40126 519 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 PKNOX1P55347 436 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 ZNF791Q3KP31 576 aaPredicted RBP23.08■■□□□ 1.29
HMGN1-217ENST00000489072 SLC48A1Q6P1K1 146 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 BNC2Q6ZN30 1099 aaPredicted RBP23.08■■□□□ 1.29
HMGN1-217ENST00000489072 SLC29A4Q7RTT9 530 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 GALNT12Q8IXK2 581 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 CCNYL1Q8N7R7 359 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 OR52N2Q8NGI0 321 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 SLC22A8Q8TCC7 542 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 AGAP11Q8TF27 550 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 SGCZQ96LD1 299 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 STK38LQ9Y2H1 464 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 TIMM22Q9Y584 194 aa23.08■■□□□ 1.29
HMGN1-217ENST00000489072 NINQ8N4C6 2090 aa23.07■■□□□ 1.28
HMGN1-217ENST00000489072 C1orf226A1L170 272 aa23.07■■□□□ 1.28
HMGN1-217ENST00000489072 OR6C76A6NM76 312 aa23.07■■□□□ 1.28
HMGN1-217ENST00000489072 PLIN3O60664 434 aa23.07■■□□□ 1.28
HMGN1-217ENST00000489072 ULK1O75385 1050 aa23.07■■□□□ 1.28
HMGN1-217ENST00000489072 ESRRBO95718 433 aa23.07■■□□□ 1.28
HMGN1-217ENST00000489072 ENO1P06733 434 aaKnown RBP23.07■■□□□ 1.28
HMGN1-217ENST00000489072 ABOP16442 354 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms