RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 FOXA1P55317 472 aa20.75■□□□□ 0.91
VAMP2-204ENST00000488857 GALNT18Q6P9A2 607 aa20.75■□□□□ 0.91
VAMP2-204ENST00000488857 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.75■□□□□ 0.91
VAMP2-204ENST00000488857 C9orf40Q8IXQ3 194 aa20.75■□□□□ 0.91
VAMP2-204ENST00000488857 SRRM1Q8IYB3 904 aaKnown RBP20.75■□□□□ 0.91
VAMP2-204ENST00000488857 SSC4DQ8WTU2 575 aa20.75■□□□□ 0.91
VAMP2-204ENST00000488857 ASB15Q8WXK1 588 aa20.75■□□□□ 0.91
VAMP2-204ENST00000488857 PSMG3-AS1Q96PY0 264 aa20.75■□□□□ 0.91
VAMP2-204ENST00000488857 IQCGQ9H095 443 aaKnown RBP20.75■□□□□ 0.91
VAMP2-204ENST00000488857 CXorf21Q9HAI6 301 aa20.75■□□□□ 0.91
VAMP2-204ENST00000488857 SIRT5Q9NXA8 310 aa20.75■□□□□ 0.91
VAMP2-204ENST00000488857 ERRFI1Q9UJM3 462 aaPredicted RBP20.75■□□□□ 0.91
VAMP2-204ENST00000488857 WIPF3A6NGB9 483 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 OR6C76A6NM76 312 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 A8MVJ9 347 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 TUBBP07437 444 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 STSP08842 583 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 CPMP14384 443 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 SOX3P41225 446 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 XKP51811 444 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 SLC37A1P57057 533 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 ERVK-8P63133 956 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 RAE1P78406 368 aaKnown RBP20.74■□□□□ 0.91
VAMP2-204ENST00000488857 ZNF267Q14586 743 aaPredicted RBP20.74■□□□□ 0.91
VAMP2-204ENST00000488857 MDGA2Q7Z553 956 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 C10orf107Q8IVU9 208 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 SIAH3Q8IW03 269 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 POGLUT1Q8NBL1 392 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 TRMOQ9BU70 441 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 CNPPD1Q9BV87 410 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 FAIM2Q9BWQ8 316 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 TIMMDC1Q9NPL8 285 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 HPF1Q9NWY4 346 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 SEC14L3Q9UDX4 400 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 ERVK-19Q9WJR5 959 aa20.74■□□□□ 0.91
VAMP2-204ENST00000488857 ICE1Q9Y2F5 2266 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 A0A1W2PS29 197 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 KLRC4-KLRK1H3BQV0 150 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 TRIM13O60858 407 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 OR6B1O95007 311 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 CLPSP04118 112 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 HMGCS1Q01581 520 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 ACSM2AQ08AH3 577 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 C4orf17Q53FE4 359 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 KRTCAP3Q53RY4 240 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 PIGGQ5H8A4 983 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 ACSM2BQ68CK6 577 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 GFRALQ6UXV0 394 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 RNF111Q6ZNA4 994 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 TRIM46Q7Z4K8 759 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 GALNT12Q8IXK2 581 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 APIPQ96GX9 242 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 ERVK-11Q9UQG0 969 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 OSGIN2Q9Y236 505 aa20.73■□□□□ 0.91
VAMP2-204ENST00000488857 DIDO1Q9BTC0 2240 aaKnown RBP20.72■□□□□ 0.91
VAMP2-204ENST00000488857 GOLGA6L10A6NI86 522 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 PCDH7O60245 1069 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 ZNF354AO60765 605 aaPredicted RBP20.72■□□□□ 0.91
VAMP2-204ENST00000488857 UNC5CO95185 931 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 LDLRP01130 860 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 UROSP10746 265 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 PORP16435 677 aaPredicted RBP20.72■□□□□ 0.91
VAMP2-204ENST00000488857 GSTM5P46439 218 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 KCNK10P57789 538 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 ALDH6A1Q02252 535 aaKnown RBP20.72■□□□□ 0.91
VAMP2-204ENST00000488857 FUT7Q11130 342 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 ASPHQ12797 758 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.72■□□□□ 0.914e-6■□□□□ 10.9
VAMP2-204ENST00000488857 OPN5Q6U736 354 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 SULF2Q8IWU5 870 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 CPSF7Q8N684 471 aaKnown RBP20.72■□□□□ 0.91
VAMP2-204ENST00000488857 SLC15A4Q8N697 577 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 GOLM1Q8NBJ4 401 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 PSD4Q8NDX1 1056 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 SGCZQ96LD1 299 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 GPR137Q96N19 417 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 FAM111AQ96PZ2 611 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 GATA5Q9BWX5 397 aaPredicted RBP20.72■□□□□ 0.91
VAMP2-204ENST00000488857 TNFRSF12AQ9NP84 129 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 SENP1Q9P0U3 644 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 PSME2Q9UL46 239 aa20.72■□□□□ 0.91
VAMP2-204ENST00000488857 PEX1O43933 1283 aa20.71■□□□□ 0.91
VAMP2-204ENST00000488857 ATP1B1P05026 303 aa20.71■□□□□ 0.91
VAMP2-204ENST00000488857 DRD2P14416 443 aa20.71■□□□□ 0.91
VAMP2-204ENST00000488857 TIA1P31483 386 aaKnown RBP eCLIP20.71■□□□□ 0.91
VAMP2-204ENST00000488857 SRSF11Q05519 484 aaKnown RBP20.71■□□□□ 0.91
VAMP2-204ENST00000488857 EBPQ15125 230 aaKnown RBP20.71■□□□□ 0.91
VAMP2-204ENST00000488857 RNFT1Q5M7Z0 435 aa20.71■□□□□ 0.91
VAMP2-204ENST00000488857 IL20RBQ6UXL0 311 aa20.71■□□□□ 0.91
VAMP2-204ENST00000488857 RNF165Q6ZSG1 346 aa20.71■□□□□ 0.91
VAMP2-204ENST00000488857 SLC29A4Q7RTT9 530 aa20.71■□□□□ 0.91
VAMP2-204ENST00000488857 MMP21Q8N119 569 aa20.71■□□□□ 0.91
VAMP2-204ENST00000488857 ZFP62Q8NB50 900 aaPredicted RBP20.71■□□□□ 0.91
VAMP2-204ENST00000488857 SMC6Q96SB8 1091 aa20.71■□□□□ 0.91
VAMP2-204ENST00000488857 WWTR1Q9GZV5 400 aa20.71■□□□□ 0.91
VAMP2-204ENST00000488857 CROCCQ5TZA2 2017 aa20.7■□□□□ 0.9
VAMP2-204ENST00000488857 GNG14A0A1W2PPG7 69 aa20.7■□□□□ 0.9
VAMP2-204ENST00000488857 NPIPB8E9PQR5 432 aa20.7■□□□□ 0.9
VAMP2-204ENST00000488857 CRCPO75575 148 aa20.7■□□□□ 0.9
VAMP2-204ENST00000488857 WISP2O76076 250 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms