RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 MAPK12P53778 367 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 NAA20P61599 178 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 HMGCS1Q01581 520 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 OC90Q02509 493 aaPredicted RBP13.17□□□□□ -0.3
COL9A2-208ENST00000488463 DUSP2Q05923 314 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 ZNF844Q08AG5 666 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 MGAT2Q10469 447 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 ZNF750Q32MQ0 723 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 LIPMQ5VYY2 423 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 SLC48A1Q6P1K1 146 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 SCIMPQ6UWF3 145 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 SRRM1Q8IYB3 904 aaKnown RBP13.17□□□□□ -0.3
COL9A2-208ENST00000488463 SREK1Q8WXA9 508 aaKnown RBP13.17□□□□□ -0.3
COL9A2-208ENST00000488463 RBM18Q96H35 190 aaKnown RBP13.17□□□□□ -0.3
COL9A2-208ENST00000488463 PSMG3-AS1Q96PY0 264 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 RASL10BQ96S79 203 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 CXorf21Q9HAI6 301 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 HEY2Q9UBP5 337 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 MCM8Q9UJA3 840 aa13.17□□□□□ -0.3
COL9A2-208ENST00000488463 ERRFI1Q9UJM3 462 aaPredicted RBP13.17□□□□□ -0.3
COL9A2-208ENST00000488463 DNAJC13O75165 2243 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 NOTCH2Q04721 2471 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 WWP2O00308 870 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 NADKO95544 446 aaPredicted RBP13.16□□□□□ -0.3
COL9A2-208ENST00000488463 CT62P0C5K7 136 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 COX7A2P14406 83 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 SERPINB3P29508 390 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 ARRB2P32121 409 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 SOX3P41225 446 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 SSR4P51571 173 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 SLC37A1P57057 533 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 TRA2BP62995 288 aaKnown RBP13.16□□□□□ -0.3
COL9A2-208ENST00000488463 ERVK-8P63133 956 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 IFFO1Q0D2I5 559 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 MPEG1Q2M385 716 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 TNFAIP8L3Q5GJ75 292 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 PIGGQ5H8A4 983 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 FHL5Q5TD97 284 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 LYPD8Q6UX82 237 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 TRIM46Q7Z4K8 759 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.16□□□□□ -0.3
COL9A2-208ENST00000488463 HORMAD2Q8N7B1 307 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 TMEM178AQ8NBL3 297 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 OR6Y1Q8NGX8 325 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 NUBPLQ8TB37 319 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 PRR7Q8TB68 274 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.16□□□□□ -0.3
COL9A2-208ENST00000488463 C5orf34Q96MH7 638 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 ZNF681Q96N22 645 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 FAM111AQ96PZ2 611 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 PELOQ9BRX2 385 aaKnown RBP13.16□□□□□ -0.3
COL9A2-208ENST00000488463 WDR41Q9HAD4 459 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 NMRK1Q9NWW6 199 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 ERVK-19Q9WJR5 959 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 EXPH5Q8NEV8 1989 aa13.16□□□□□ -0.3
COL9A2-208ENST00000488463 C1orf226A1L170 272 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 NPIPB8E9PQR5 432 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 H3BQF6 201 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 TRIM13O60858 407 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 SPAG7O75391 227 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 CRYABP02511 175 aaKnown RBP13.15□□□□□ -0.3
COL9A2-208ENST00000488463 CPMP14384 443 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 ALDH3A1P30838 453 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 ETV4P43268 484 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 XKP51811 444 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 FUT7Q11130 342 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 ZNF267Q14586 743 aaPredicted RBP13.15□□□□□ -0.3
COL9A2-208ENST00000488463 EBPQ15125 230 aaKnown RBP13.15□□□□□ -0.3
COL9A2-208ENST00000488463 MAPKAPK3Q16644 382 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 CHERPQ8IWX8 916 aaKnown RBP13.15□□□□□ -0.3
COL9A2-208ENST00000488463 CYP4Z2PQ8N1L4 340 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 TMEM156Q8N614 296 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 CPSF7Q8N684 471 aaKnown RBP13.15□□□□□ -0.3
COL9A2-208ENST00000488463 ZNF615Q8N8J6 731 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 ZNF441Q8N8Z8 693 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 OR4K14Q8NGD5 310 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 TCP10LQ8TDR4 215 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 RIT1Q92963 219 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 MECRQ9BV79 373 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 SH2D2AQ9NP31 389 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 DEPPQ9NTK1 212 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 COPS7AQ9UBW8 275 aa13.15□□□□□ -0.3
COL9A2-208ENST00000488463 LRBAP50851 2863 aa13.14□□□□□ -0.31
COL9A2-208ENST00000488463 CTIFO43310 598 aaKnown RBP13.14□□□□□ -0.31
COL9A2-208ENST00000488463 PCDH7O60245 1069 aa13.14□□□□□ -0.31
COL9A2-208ENST00000488463 OR10H2O60403 315 aa13.14□□□□□ -0.31
COL9A2-208ENST00000488463 LDLRP01130 860 aa13.14□□□□□ -0.31
COL9A2-208ENST00000488463 STSP08842 583 aa13.14□□□□□ -0.31
COL9A2-208ENST00000488463 PORP16435 677 aaPredicted RBP13.14□□□□□ -0.31
COL9A2-208ENST00000488463 PIK3R1P27986 724 aa13.14□□□□□ -0.31
COL9A2-208ENST00000488463 SSTR4P31391 388 aa13.14□□□□□ -0.31
COL9A2-208ENST00000488463 TIA1P31483 386 aaKnown RBP eCLIP13.14□□□□□ -0.31
COL9A2-208ENST00000488463 KCNK10P57789 538 aa13.14□□□□□ -0.31
COL9A2-208ENST00000488463 DUSP8Q13202 625 aa13.14□□□□□ -0.31
COL9A2-208ENST00000488463 KIAA0040Q15053 153 aa13.14□□□□□ -0.31
COL9A2-208ENST00000488463 PRSS53Q2L4Q9 553 aa13.14□□□□□ -0.31
COL9A2-208ENST00000488463 UGT3A2Q3SY77 523 aa13.14□□□□□ -0.31
COL9A2-208ENST00000488463 SPIN4Q56A73 249 aa13.14□□□□□ -0.31
COL9A2-208ENST00000488463 CFAP157Q5JU67 520 aa13.14□□□□□ -0.31
COL9A2-208ENST00000488463 CLEC6AQ6EIG7 209 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms