RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SCAMP2O15127 329 aaKnown RBP10.3□□□□□ -0.76
UBE4B-210ENST00000488228 MAN1A2O60476 641 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 EDF1O60869 148 aaKnown RBP10.3□□□□□ -0.76
UBE4B-210ENST00000488228 VPS4BO75351 444 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 DDAH2O95865 285 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 CT62P0C5K7 136 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 SLC35E2P0CK97 266 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 G6PDP11413 515 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 LBPP18428 481 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 NT5EP21589 574 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 EMX2Q04743 252 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 TMEM198Q66K66 360 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 B3GNTL1Q67FW5 361 aaPredicted RBP10.3□□□□□ -0.76
UBE4B-210ENST00000488228 NXNQ6DKJ4 435 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 LARP4Q71RC2 724 aaKnown RBP eCLIP10.3□□□□□ -0.76
UBE4B-210ENST00000488228 GALNT12Q8IXK2 581 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 LRRC25Q8N386 305 aaPredicted RBP10.3□□□□□ -0.76
UBE4B-210ENST00000488228 APCDD1LQ8NCL9 501 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 ADCY4Q8NFM4 1077 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 OR9A2Q8NGT5 310 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 C9orf43Q8TAL5 461 aaPredicted RBP10.3□□□□□ -0.76
UBE4B-210ENST00000488228 PSMF1Q92530 271 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 CIDECQ96AQ7 238 aaPredicted RBP10.3□□□□□ -0.76
UBE4B-210ENST00000488228 ABHD17AQ96GS6 310 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 ZNF681Q96N22 645 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 UBL7Q96S82 380 aaPredicted RBP10.3□□□□□ -0.76
UBE4B-210ENST00000488228 EBF4Q9BQW3 602 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 PELOQ9BRX2 385 aaKnown RBP10.3□□□□□ -0.76
UBE4B-210ENST00000488228 SEMA4CQ9C0C4 833 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 KCNK13Q9HB14 408 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 MMP25Q9NPA2 562 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 SLAMF7Q9NQ25 335 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 SLC35C2Q9NQQ7 365 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 ZNF71Q9NQZ8 489 aaPredicted RBP10.3□□□□□ -0.76
UBE4B-210ENST00000488228 GIMAP4Q9NUV9 329 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 ASIC5Q9NY37 505 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 EHD3Q9NZN3 535 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 PTGFRNQ9P2B2 879 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 ERVK-19Q9WJR5 959 aa10.3□□□□□ -0.76
UBE4B-210ENST00000488228 EIF3LQ9Y262 564 aaKnown RBP10.3□□□□□ -0.76
UBE4B-210ENST00000488228 SMG1Q96Q15 3661 aaKnown RBP10.3□□□□□ -0.76
UBE4B-210ENST00000488228 SPENQ96T58 3664 aaKnown RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 SYNDIG1LA6NDD5 238 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 A8MUI8 341 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 C9JVG2 144 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 PRKNO60260 465 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 CLPSP04118 112 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 PORP16435 677 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 CSNK2A2P19784 350 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 EFNA1P20827 205 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 NTSP30990 170 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 SSTR4P31391 388 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 SOX11P35716 441 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 MDH1P40925 334 aaKnown RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 ASMTP46597 345 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 ST13P50502 369 aaKnown RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 GPR143P51810 404 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 AQP5P55064 265 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 NME5P56597 212 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 SOX8P57073 446 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 MRPS35P82673 323 aaKnown RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 MAD2L1Q13257 205 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 PDE7AQ13946 482 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 ZNF267Q14586 743 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 SPRED3Q2MJR0 410 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 OGFOD2Q6N063 350 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 EPGNQ6UW88 154 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 LINC00696Q6ZRV3 163 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 MORN4Q8NDC4 146 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 OR7A2PQ8NGA2 310 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 SUN3Q8TAQ9 357 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 M1APQ8TC57 530 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 ELP5Q8TE02 316 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 ZNF721Q8TF20 911 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 THAP3Q8WTV1 239 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 DAZLQ92904 295 aaKnown RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 RIT1Q92963 219 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 PPCDCQ96CD2 204 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 VMP1Q96GC9 406 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 RBM18Q96H35 190 aaKnown RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 FBXL20Q96IG2 436 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 MAELQ96JY0 434 aaKnown RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 BBC3Q96PG8 261 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 NPAS2Q99743 824 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 BRINP2Q9C0B6 783 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 ADNPQ9H2P0 1102 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 REEP4Q9H6H4 257 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 ZNF552Q9H707 407 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 CXorf21Q9HAI6 301 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 ZBTB20Q9HC78 741 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 NPHS2Q9NP85 383 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 FGFR1OP2Q9NVK5 253 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 AIG1Q9NVV5 245 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 MAT2BQ9NZL9 334 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 G3BP2Q9UN86 482 aaKnown RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 PPIEQ9UNP9 301 aaKnown RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 PCDHGA9Q9Y5G4 932 aaKnown RBP10.29□□□□□ -0.76
UBE4B-210ENST00000488228 ZNF780BQ9Y6R6 833 aa10.29□□□□□ -0.76
UBE4B-210ENST00000488228 E9PBE3 544 aa10.28□□□□□ -0.76
UBE4B-210ENST00000488228 ATXN7O15265 892 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms