RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 KCNJ13O60928 360 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 WDR47O94967 919 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 IMPA1P29218 277 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 UAP1L1Q3KQV9 507 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 RUNDC3AQ59EK9 446 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 KIAA1614Q5VZ46 1190 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 UNC5DQ6UXZ4 953 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 PARGQ86W56 976 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 SFTPA2Q8IWL1 248 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 PHACTR4Q8IZ21 702 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 FAM109AQ8N4B1 249 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 OR9A1PQ8NGU1 263 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 ZNF480Q8WV37 535 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 DNASE2BQ8WZ79 361 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 NCLNQ969V3 563 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 NACC2Q96BF6 587 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 TBCDQ9BTW9 1192 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 IPPKQ9H8X2 491 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 SLC25A37Q9NYZ2 338 aa13.02□□□□□ -0.32
COPS7B-221ENST00000488111 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.02□□□□□ -0.32
COPS7B-221ENST00000488111 MEIOCA2RUB1 952 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 OR7A17O14581 309 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 OR4F21O95013 312 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 IL7P13232 177 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 CTSEP14091 401 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 MAPK9P45984 424 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 HNMTP50135 292 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 IL1RL1Q01638 556 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 PRRT3Q5FWE3 981 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 CALHM3Q86XJ0 350 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 TCAIMQ8N3R3 496 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 OR5K2Q8NHB8 316 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 NETO1Q8TDF5 533 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 SLC7A6Q92536 515 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 RNF167Q9H6Y7 350 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 WDR70Q9NW82 654 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 TTC28Q96AY4 2481 aa13.02□□□□□ -0.33
COPS7B-221ENST00000488111 POLR1CO15160 346 aaPredicted RBP13.01□□□□□ -0.33
COPS7B-221ENST00000488111 BCAT2O15382 392 aaPredicted RBP13.01□□□□□ -0.33
COPS7B-221ENST00000488111 PCDHGA12O60330 932 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 EPHA2P29317 976 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 HNF4AP41235 474 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 HTR2BP41595 481 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 OR3A3P47888 321 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 SLC6A12P48065 614 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 ILF3Q12906 894 aaKnown RBP eCLIP13.01□□□□□ -0.334e-8■□□□□ 8.8
COPS7B-221ENST00000488111 KRT33BQ14525 404 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 LAPTM4AQ15012 233 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 RPE65Q16518 533 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 SMU1Q2TAY7 513 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 CDKL4Q5MAI5 379 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 SUSD1Q6UWL2 747 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 TAF8Q7Z7C8 310 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 ZDHHC21Q8IVQ6 265 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 DCUN1D3Q8IWE4 304 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 UBTD2Q8WUN7 234 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 RAD51AP1Q96B01 352 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 ZNF382Q96SR6 550 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 SLC30A2Q9BRI3 323 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 COPS4Q9BT78 406 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 OR51E2Q9H255 320 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 SLC32A1Q9H598 525 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 TMEM74BQ9NUR3 256 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 ERVK13-1Q9NX77 482 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 KCNN3Q9UGI6 736 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 POLR3HQ9Y535 204 aaPredicted RBP13.01□□□□□ -0.33
COPS7B-221ENST00000488111 LAMA1P25391 3075 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 VPS13AQ96RL7 3174 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 TRBV5-3A0A0A0MS03 114 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 SLITRK5O94991 958 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 GZMMP51124 257 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 ERVPABLB-1P60509 514 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 CDONQ4KMG0 1287 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 SOWAHCQ53LP3 525 aaPredicted RBP13.01□□□□□ -0.33
COPS7B-221ENST00000488111 ATG9BQ674R7 924 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 OR2T5Q6IEZ7 315 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 ENTHD1Q8IYW4 607 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 FBXL6Q8N531 539 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 NATD1Q8N6N6 113 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 CDYL2Q8N8U2 506 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 FBXO15Q8NCQ5 510 aaPredicted RBP13.01□□□□□ -0.33
COPS7B-221ENST00000488111 OR2T29Q8NH02 315 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 PATE1Q8WXA2 126 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 UBE2FQ969M7 185 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 Q96MT0 163 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 XKR8Q9H6D3 395 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 RASSF1Q9NS23 344 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 PLCXD1Q9NUJ7 323 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 FKBP14Q9NWM8 211 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 APOBEC3BQ9UH17 382 aaKnown RBP13.01□□□□□ -0.33
COPS7B-221ENST00000488111 PSORS1C1Q9UIG5 152 aa13.01□□□□□ -0.33
COPS7B-221ENST00000488111 LOC100506127A0A0U1RQW1 187 aa13□□□□□ -0.33
COPS7B-221ENST00000488111 FAM86C2PA6NEL3 165 aa13□□□□□ -0.33
COPS7B-221ENST00000488111 EPB42P16452 691 aa13□□□□□ -0.33
COPS7B-221ENST00000488111 EPORP19235 508 aa13□□□□□ -0.33
COPS7B-221ENST00000488111 FPR1P21462 350 aa13□□□□□ -0.33
COPS7B-221ENST00000488111 HTR6P50406 440 aa13□□□□□ -0.33
COPS7B-221ENST00000488111 TARDBPQ13148 414 aaKnown RBP eCLIP13□□□□□ -0.33
COPS7B-221ENST00000488111 SLAMF1Q13291 335 aa13□□□□□ -0.33
COPS7B-221ENST00000488111 GPAT3Q53EU6 434 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms