RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 TBCDQ9BTW9 1192 aa14.03□□□□□ -0.16
MCF2L-228ENST00000487354 REPIN1Q9BWE0 567 aaKnown RBP14.03□□□□□ -0.16
MCF2L-228ENST00000487354 CAMK2AQ9UQM7 478 aa14.03□□□□□ -0.16
MCF2L-228ENST00000487354 C15orf41Q9Y2V0 281 aa14.03□□□□□ -0.16
MCF2L-228ENST00000487354 SONP18583 2426 aaKnown RBP14.02□□□□□ -0.16
MCF2L-228ENST00000487354 FAM95CA0A1B0GW59 222 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 TRIM64A6NGJ6 449 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 TRIM64BA6NI03 449 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 INAFM1C9JVW0 142 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 ACSL3O95573 720 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 OPRM1P35372 400 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 FBXW4P57775 412 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 HERVK_113P63132 956 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 ERVK-8P63133 956 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 SPRED3Q2MJR0 410 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 EIPR1Q53HC9 387 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 HP1BP3Q5SSJ5 553 aaPredicted RBP14.02□□□□□ -0.17
MCF2L-228ENST00000487354 ADGRE4PQ86SQ3 457 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 PM20D2Q8IYS1 436 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 NKAPQ8N5F7 415 aaKnown RBP14.02□□□□□ -0.17
MCF2L-228ENST00000487354 GABPB2Q8TAK5 448 aaPredicted RBP14.02□□□□□ -0.17
MCF2L-228ENST00000487354 PTCD3Q96EY7 689 aaKnown RBP14.02□□□□□ -0.17
MCF2L-228ENST00000487354 Q96MF0 132 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 RILPQ96NA2 401 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 DGAT2Q96PD7 388 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 GAL3ST4Q96RP7 486 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 PIP5K1AQ99755 562 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 ERVK-6Q9BXR3 956 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 CALHM2Q9HA72 323 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 DNAJC11Q9NVH1 559 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 CTNNAL1Q9UBT7 734 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 ERVK-19Q9WJR5 959 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 TESMINQ9Y4I5 508 aa14.02□□□□□ -0.17
MCF2L-228ENST00000487354 SH3D21A4FU49 640 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 WASHC1A8K0Z3 465 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 DNALI1O14645 258 aaPredicted RBP14.01□□□□□ -0.17
MCF2L-228ENST00000487354 SH3BGRLO75368 114 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 COX7A2P14406 83 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 CPN2P22792 545 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 IVDP26440 423 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 SERPINB3P29508 390 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 CDC25BP30305 580 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 HPDP32754 393 aaPredicted RBP14.01□□□□□ -0.17
MCF2L-228ENST00000487354 ELK3P41970 407 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 MSH2P43246 934 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 HSPA7P48741 367 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 NAGLUP54802 743 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 HNRNPH2P55795 449 aaKnown RBP14.01□□□□□ -0.17
MCF2L-228ENST00000487354 PLIN5Q00G26 463 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 TNFRSF17Q02223 184 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 C18orf63Q68DL7 685 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 PLXDC2Q6UX71 529 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 SYDE1Q6ZW31 735 aaPredicted RBP14.01□□□□□ -0.17
MCF2L-228ENST00000487354 RNF175Q8N4F7 328 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 TRIM58Q8NG06 486 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 PPP1R14CQ8TAE6 165 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 SPPL2AQ8TCT8 520 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 SLC44A1Q8WWI5 657 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 DIO2Q92813 273 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 CFAP36Q96G28 342 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 GNRHR2Q96P88 292 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 NAT9Q9BTE0 207 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 G6PC3Q9BUM1 346 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 RBM24Q9BX46 236 aaKnown RBP14.01□□□□□ -0.17
MCF2L-228ENST00000487354 ZNF717Q9BY31 904 aaPredicted RBP14.01□□□□□ -0.17
MCF2L-228ENST00000487354 ANGPTL4Q9BY76 406 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 ROGDIQ9GZN7 287 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 PPANQ9NQ55 473 aaKnown RBP14.01□□□□□ -0.17
MCF2L-228ENST00000487354 CHMP2BQ9UQN3 213 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 NPFFR2Q9Y5X5 522 aa14.01□□□□□ -0.17
MCF2L-228ENST00000487354 A0A1W2PS29 197 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 DEFB108AA8MXU0 73 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 SAP18O00422 153 aaKnown RBP14□□□□□ -0.17
MCF2L-228ENST00000487354 TRAPPC6AO75865 159 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 TMIGD3P0DMS9 266 aaPredicted RBP14□□□□□ -0.17
MCF2L-228ENST00000487354 ALOX15P16050 662 aaPredicted RBP14□□□□□ -0.17
MCF2L-228ENST00000487354 PTPN6P29350 595 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 CASP2P42575 452 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 TGM3Q08188 693 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 RPS6KA2Q15349 733 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 OR4D1Q15615 310 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 WIPI1Q5MNZ9 446 aaPredicted RBP14□□□□□ -0.17
MCF2L-228ENST00000487354 TBCELQ5QJ74 424 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 FRA10AC1Q70Z53 315 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 GAS2L3Q86XJ1 694 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 LAS2Q8IYD9 372 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 ST13P4Q8IZP2 240 aaPredicted RBP14□□□□□ -0.17
MCF2L-228ENST00000487354 SPATA6LQ8N4H0 392 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 SIMC1Q8NDZ2 872 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 ISL2Q96A47 359 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 TUBA1CQ9BQE3 449 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 EFCAB11Q9BUY7 163 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 CAPS2Q9BXY5 557 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 DERL2Q9GZP9 239 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 RPF2Q9H7B2 306 aaKnown RBP14□□□□□ -0.17
MCF2L-228ENST00000487354 TEX264Q9Y6I9 313 aa14□□□□□ -0.17
MCF2L-228ENST00000487354 CLGNO14967 610 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 SMAD7O15105 426 aaKnown RBP13.99□□□□□ -0.17
MCF2L-228ENST00000487354 ARHGEF9O43307 516 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 TGFB1P01137 390 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms