RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 TGFBR3LH3BV60 316 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 LCMT2O60294 686 aaKnown RBP10.61□□□□□ -0.71
TRIM56-204ENST00000487252 CDH16O75309 829 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 SLC16A8O95907 504 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 THBDP07204 575 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 ZNF16P17020 682 aaPredicted RBP10.61□□□□□ -0.71
TRIM56-204ENST00000487252 ALOX12P18054 663 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 GCAP28676 217 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 MAGEA6P43360 314 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 SLC6A12P48065 614 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 GDF10P55107 478 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 EIF3EP60228 445 aaKnown RBP10.61□□□□□ -0.71
TRIM56-204ENST00000487252 KCNJ2P63252 427 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 RCAN2Q14206 197 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 SEMA3AQ14563 771 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 DEFB134Q4QY38 66 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 MIDNQ504T8 468 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 HECTD2Q5U5R9 776 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 NIPAL1Q6NVV3 410 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 HSDL2Q6YN16 418 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 CENPUQ71F23 418 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 LDB1Q86U70 411 aaPredicted RBP10.61□□□□□ -0.71
TRIM56-204ENST00000487252 FBXO15Q8NCQ5 510 aaPredicted RBP10.61□□□□□ -0.71
TRIM56-204ENST00000487252 PPFIBP2Q8ND30 876 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 OR13J1Q8NGT2 312 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 LILRB1Q8NHL6 650 aaPredicted RBP10.61□□□□□ -0.71
TRIM56-204ENST00000487252 GSDMBQ8TAX9 411 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 WNT2BQ93097 391 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 HAUS1Q96CS2 278 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 CHMP6Q96FZ7 201 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 RHNO1Q9BSD3 238 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 PPANQ9NQ55 473 aaKnown RBP10.61□□□□□ -0.71
TRIM56-204ENST00000487252 ELOVL5Q9NYP7 299 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 MMACHCQ9Y4U1 282 aa10.61□□□□□ -0.71
TRIM56-204ENST00000487252 A0A1W2PNV4 684 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 SMIM23A6NLE4 172 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 HACD1B0YJ81 288 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 C16orf97H3BN30 126 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 TRIM3O75382 744 aaPredicted RBP10.6□□□□□ -0.71
TRIM56-204ENST00000487252 PSIP1O75475 530 aaKnown RBP10.6□□□□□ -0.71
TRIM56-204ENST00000487252 B3GALT4O96024 378 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 RBP3P10745 1247 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 CPN1P15169 458 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 CHRM3P20309 590 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 PSMB4P28070 264 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 PPP2R1BP30154 601 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 CDKN1AP38936 164 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 CDK9P50750 372 aaKnown RBP10.6□□□□□ -0.71
TRIM56-204ENST00000487252 SLC18A1P54219 525 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 ARL4CP56559 192 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 SKP1P63208 163 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 MPEG1Q2M385 716 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 BBS9Q3SYG4 887 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 ANKRD22Q5VYY1 191 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 ITPRIPL1Q6GPH6 555 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 CAPN13Q6MZZ7 669 aaPredicted RBP10.6□□□□□ -0.71
TRIM56-204ENST00000487252 LYPD8Q6UX82 237 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 ZNF534Q76KX8 674 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 GCNT2Q8N0V5 402 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 LRRC17Q8N6Y2 441 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 SKA2Q8WVK7 121 aaPredicted RBP10.6□□□□□ -0.71
TRIM56-204ENST00000487252 AKAP1Q92667 903 aaKnown RBP eCLIP10.6□□□□□ -0.71
TRIM56-204ENST00000487252 STARD4Q96DR4 205 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 ZC3HAV1LQ96H79 300 aaKnown RBP10.6□□□□□ -0.71
TRIM56-204ENST00000487252 PKP4Q99569 1192 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 TTC1Q99614 292 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 TUBA1CQ9BQE3 449 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 RABEP2Q9H5N1 569 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 BARX1Q9HBU1 254 aaPredicted RBP10.6□□□□□ -0.71
TRIM56-204ENST00000487252 PNO1Q9NRX1 252 aaKnown RBP10.6□□□□□ -0.71
TRIM56-204ENST00000487252 INTS9Q9NV88 658 aaKnown RBP10.6□□□□□ -0.71
TRIM56-204ENST00000487252 CLCF1Q9UBD9 225 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 LIPT1Q9Y234 373 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 SLC6A5Q9Y345 797 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 PRR14LQ5THK1 2151 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 ALPK2Q86TB3 2170 aa10.6□□□□□ -0.71
TRIM56-204ENST00000487252 FAM234BA2RU67 622 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 TMEM89A2RUT3 159 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 ZNF839A8K0R7 811 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 EIF3FO00303 357 aaPredicted RBP10.59□□□□□ -0.71
TRIM56-204ENST00000487252 PRMT5O14744 637 aaPredicted RBP10.59□□□□□ -0.71
TRIM56-204ENST00000487252 SLC35G6P0C7Q6 338 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 RNH1P13489 461 aaKnown RBP10.59□□□□□ -0.71
TRIM56-204ENST00000487252 GDF1P27539 372 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 GPX6P59796 221 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 RNF4P78317 190 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 PDIA2Q13087 525 aaKnown RBP10.59□□□□□ -0.71
TRIM56-204ENST00000487252 TSTA3Q13630 321 aaPredicted RBP10.59□□□□□ -0.71
TRIM56-204ENST00000487252 SPARCL1Q14515 664 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 KCNJ11Q14654 390 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 PIGGQ5H8A4 983 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 PRAMEF20Q5VT98 475 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 C4orf22Q6V702 233 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 DNAJC14Q6Y2X3 702 aaPredicted RBP10.59□□□□□ -0.71
TRIM56-204ENST00000487252 PIGWQ7Z7B1 504 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 P3H4Q92791 437 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 UCN3Q969E3 161 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 PANX3Q96QZ0 392 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 G6PC3Q9BUM1 346 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 P2RY12Q9H244 342 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms