RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 CYP4Z2PQ8N1L4 340 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 TMEM178AQ8NBL3 297 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 FAM98AQ8NCA5 519 aaKnown RBP9.51□□□□□ -0.89
NEK4-204ENST00000487068 NFAM1Q8NET5 270 aaPredicted RBP9.51□□□□□ -0.89
NEK4-204ENST00000487068 OR4K14Q8NGD5 310 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 PTPMT1Q8WUK0 201 aaPredicted RBP9.51□□□□□ -0.89
NEK4-204ENST00000487068 ASB15Q8WXK1 588 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 RIT1Q92963 219 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 MIB2Q96AX9 1013 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 C19orf60Q96EN9 201 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 APIPQ96GX9 242 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 PSMG3-AS1Q96PY0 264 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 BRINP2Q9C0B6 783 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 LIN28AQ9H9Z2 209 aaKnown RBP9.51□□□□□ -0.89
NEK4-204ENST00000487068 MIEF1Q9NQG6 463 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 GIMAP4Q9NUV9 329 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 ASF1BQ9NVP2 202 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.51□□□□□ -0.89
NEK4-204ENST00000487068 ARGLU1Q9NWB6 273 aaPredicted RBP9.51□□□□□ -0.89
NEK4-204ENST00000487068 MCM8Q9UJA3 840 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 ERVK-11Q9UQG0 969 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 ENTPD4Q9Y227 616 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 CLDN16Q9Y5I7 305 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 PTGDR2Q9Y5Y4 395 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 ZNF780BQ9Y6R6 833 aa9.51□□□□□ -0.89
NEK4-204ENST00000487068 RP1L1Q8IWN7 2480 aaPredicted RBP9.51□□□□□ -0.89
NEK4-204ENST00000487068 SPENQ96T58 3664 aaKnown RBP9.51□□□□□ -0.89
NEK4-204ENST00000487068 NCKAP5O14513 1909 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 RELNP78509 3460 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 WASHC1A8K0Z3 465 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 A8MVJ9 347 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 TMEM233B4DJY2 109 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 WWP2O00308 870 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 SLC28A1O00337 649 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 PGRMC2O15173 223 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 TYROBPO43914 113 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 SEC22BO75396 215 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 SLC25A12O75746 678 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 ZWINTO95229 277 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 HSPA4LO95757 839 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 BPGMP07738 259 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 ANXA4P09525 319 aaPredicted RBP9.5□□□□□ -0.89
NEK4-204ENST00000487068 FEN1P39748 380 aaKnown RBP9.5□□□□□ -0.89
NEK4-204ENST00000487068 UQCRFS1P47985 274 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 SERPINB4P48594 390 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 GPR143P51810 404 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 MLF1P58340 268 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 TRA2BP62995 288 aaKnown RBP9.5□□□□□ -0.89
NEK4-204ENST00000487068 IGLV3-21P80748 117 aaPredicted RBP9.5□□□□□ -0.89
NEK4-204ENST00000487068 BIKQ13323 160 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 HEPACAMQ14CZ8 416 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 INAQ16352 499 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 MAPKAPK3Q16644 382 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 GALNTL6Q49A17 601 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 ARL13AQ5H913 290 aaPredicted RBP9.5□□□□□ -0.89
NEK4-204ENST00000487068 HHATQ5VTY9 493 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 HLA-DQA1Q5Y7H0 255 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 SLC48A1Q6P1K1 146 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 EXOC3L1Q86VI1 746 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 GALNT12Q8IXK2 581 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 MMP21Q8N119 569 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 BCORP1Q8N888 145 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 ZNF321PQ8N8H1 164 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 MGARPQ8TDB4 240 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 GRHL3Q8TE85 626 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 CHTF18Q8WVB6 975 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 TWIST2Q8WVJ9 160 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 UCN3Q969E3 161 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 EXOSC8Q96B26 276 aaKnown RBP9.5□□□□□ -0.89
NEK4-204ENST00000487068 PGM2Q96G03 612 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 FBXL20Q96IG2 436 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 SIGLEC12Q96PQ1 595 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 NPAS2Q99743 824 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 TNFRSF12AQ9NP84 129 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 OLAHQ9NV23 265 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 HPF1Q9NWY4 346 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 ZNF223Q9UK11 482 aaPredicted RBP9.5□□□□□ -0.89
NEK4-204ENST00000487068 UTS2RQ9UKP6 389 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 PSME2Q9UL46 239 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 DLGAP4Q9Y2H0 992 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 PCDHA9Q9Y5H5 950 aa9.5□□□□□ -0.89
NEK4-204ENST00000487068 NUP214P35658 2090 aaPredicted RBP9.49□□□□□ -0.89
NEK4-204ENST00000487068 A0A1W2PS29 197 aa9.49□□□□□ -0.89
NEK4-204ENST00000487068 PRKNO60260 465 aaPredicted RBP9.49□□□□□ -0.89
NEK4-204ENST00000487068 OR2J2O76002 312 aa9.49□□□□□ -0.89
NEK4-204ENST00000487068 RSL1D1O76021 490 aaKnown RBP9.49□□□□□ -0.89
NEK4-204ENST00000487068 DDAH2O95865 285 aa9.49□□□□□ -0.89
NEK4-204ENST00000487068 LINC00032P0C843 101 aa9.49□□□□□ -0.89
NEK4-204ENST00000487068 SLC35E2P0CK97 266 aa9.49□□□□□ -0.89
NEK4-204ENST00000487068 CPMP14384 443 aa9.49□□□□□ -0.89
NEK4-204ENST00000487068 PORP16435 677 aaPredicted RBP9.49□□□□□ -0.89
NEK4-204ENST00000487068 GNLYP22749 145 aa9.49□□□□□ -0.89
NEK4-204ENST00000487068 PTGER1P34995 402 aa9.49□□□□□ -0.89
NEK4-204ENST00000487068 SERPINB5P36952 375 aa9.49□□□□□ -0.89
NEK4-204ENST00000487068 CD96P40200 585 aa9.49□□□□□ -0.89
NEK4-204ENST00000487068 XKP51811 444 aa9.49□□□□□ -0.89
NEK4-204ENST00000487068 HK2P52789 917 aa9.49□□□□□ -0.89
NEK4-204ENST00000487068 RPL38P63173 70 aaKnown RBP9.49□□□□□ -0.89
NEK4-204ENST00000487068 RNF4P78317 190 aa9.49□□□□□ -0.89
NEK4-204ENST00000487068 PMP22Q01453 160 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms