RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 NR2F6P10588 404 aa22.64■■□□□ 1.21
LIME1-206ENST00000487026 SSTR2P30874 369 aa22.64■■□□□ 1.21
LIME1-206ENST00000487026 CCNG1P51959 295 aa22.64■■□□□ 1.21
LIME1-206ENST00000487026 SLC10A1Q14973 349 aa22.64■■□□□ 1.21
LIME1-206ENST00000487026 PRAMEF20Q5VT98 475 aa22.64■■□□□ 1.21
LIME1-206ENST00000487026 ADGRD1Q6QNK2 874 aa22.64■■□□□ 1.21
LIME1-206ENST00000487026 OR5M3Q8NGP4 307 aa22.64■■□□□ 1.21
LIME1-206ENST00000487026 LILRB4Q8NHJ6 448 aa22.64■■□□□ 1.21
LIME1-206ENST00000487026 SLC44A1Q8WWI5 657 aa22.64■■□□□ 1.21
LIME1-206ENST00000487026 ASB5Q8WWX0 329 aa22.64■■□□□ 1.21
LIME1-206ENST00000487026 IFT81Q8WYA0 676 aa22.64■■□□□ 1.21
LIME1-206ENST00000487026 C16orf45Q96MC5 204 aaPredicted RBP22.64■■□□□ 1.21
LIME1-206ENST00000487026 NSUN5Q96P11 429 aaKnown RBP22.64■■□□□ 1.21
LIME1-206ENST00000487026 SH2D2AQ9NP31 389 aa22.64■■□□□ 1.21
LIME1-206ENST00000487026 PSD3Q9NYI0 1048 aa22.64■■□□□ 1.21
LIME1-206ENST00000487026 MTRF1LQ9UGC7 380 aaKnown RBP22.64■■□□□ 1.21
LIME1-206ENST00000487026 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.64■■□□□ 1.21
LIME1-206ENST00000487026 LRATO95237 230 aa22.63■■□□□ 1.21
LIME1-206ENST00000487026 CLPSP04118 112 aa22.63■■□□□ 1.21
LIME1-206ENST00000487026 INHBAP08476 426 aa22.63■■□□□ 1.21
LIME1-206ENST00000487026 CHRNB4P30926 498 aa22.63■■□□□ 1.21
LIME1-206ENST00000487026 SLC37A1P57057 533 aa22.63■■□□□ 1.21
LIME1-206ENST00000487026 RNF111Q6ZNA4 994 aa22.63■■□□□ 1.21
LIME1-206ENST00000487026 RPS27LQ71UM5 84 aaKnown RBP22.63■■□□□ 1.21
LIME1-206ENST00000487026 SLC29A4Q7RTT9 530 aa22.63■■□□□ 1.21
LIME1-206ENST00000487026 NUDT13Q86X67 352 aa22.63■■□□□ 1.21
LIME1-206ENST00000487026 ACBD4Q8NC06 268 aa22.63■■□□□ 1.21
LIME1-206ENST00000487026 FAM13CQ8NE31 585 aa22.63■■□□□ 1.21
LIME1-206ENST00000487026 UHMK1Q8TAS1 419 aaKnown RBP22.63■■□□□ 1.21
LIME1-206ENST00000487026 SPACA9Q96E40 222 aaPredicted RBP22.63■■□□□ 1.21
LIME1-206ENST00000487026 WWTR1Q9GZV5 400 aa22.63■■□□□ 1.21
LIME1-206ENST00000487026 LDAHQ9H6V9 325 aa22.63■■□□□ 1.21
LIME1-206ENST00000487026 WDR41Q9HAD4 459 aa22.63■■□□□ 1.21
LIME1-206ENST00000487026 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.63■■□□□ 1.21
LIME1-206ENST00000487026 PCTPQ9UKL6 214 aa22.63■■□□□ 1.21
LIME1-206ENST00000487026 AKAP9Q99996 3911 aa22.63■■□□□ 1.21
LIME1-206ENST00000487026 A0A1B0GVC2 190 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 RBP1P09455 135 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 RFPL3SP0C7P2 107 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 MAGEA12P43365 314 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 HYAL4Q2M3T9 481 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 SPRED3Q2MJR0 410 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 SGO1Q5FBB7 561 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 METTL2BQ6P1Q9 378 aaKnown RBP22.62■■□□□ 1.21
LIME1-206ENST00000487026 TMEM64Q6YI46 380 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 RELL1Q8IUW5 271 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 SLC15A4Q8N697 577 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 NOA1Q8NC60 698 aaKnown RBP22.62■■□□□ 1.21
LIME1-206ENST00000487026 OR10G3Q8NGC4 313 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 PAQR8Q8TEZ7 354 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 PAFAH2Q99487 392 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 SERPINI1Q99574 410 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 PELOQ9BRX2 385 aaKnown RBP22.62■■□□□ 1.21
LIME1-206ENST00000487026 FUT8Q9BYC5 575 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 ZBTB26Q9HCK0 441 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 TEX10Q9NXF1 929 aaPredicted RBP22.62■■□□□ 1.21
LIME1-206ENST00000487026 XPR1Q9UBH6 696 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 ITGB1BP2Q9UKP3 347 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 ACAD8Q9UKU7 415 aa22.62■■□□□ 1.21
LIME1-206ENST00000487026 POC1B-GALNT4F8VUJ3 575 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 BCKDKO14874 412 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 KLK1P06870 262 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 SLC35E2P0CK97 266 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 POU3F2P20265 443 aaPredicted RBP22.61■■□□□ 1.21
LIME1-206ENST00000487026 ACVR2AP27037 513 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 SSTR4P31391 388 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 MAN2A2P49641 1150 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 KCNJ2P63252 427 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 TLE4Q04727 773 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 EBPQ15125 230 aaKnown RBP22.61■■□□□ 1.21
LIME1-206ENST00000487026 WHAMMP3Q1A5X7 153 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 FAM219BQ5XKK7 198 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 FRG2Q64ET8 278 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 TTC19Q6DKK2 380 aaPredicted RBP22.61■■□□□ 1.21
LIME1-206ENST00000487026 ACAD11Q709F0 780 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 MMGT1Q8N4V1 131 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 OR10Q1Q8NGQ4 319 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 CHTF18Q8WVB6 975 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 ZNF592Q92610 1267 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 ISL2Q96A47 359 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 FRG2BQ96QU4 278 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 EXO5Q9H790 373 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 PROK2Q9HC23 129 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 KCNJ16Q9NPI9 418 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 NPDC1Q9NQX5 325 aaPredicted RBP22.61■■□□□ 1.21
LIME1-206ENST00000487026 ALKBH4Q9NXW9 302 aa22.61■■□□□ 1.21
LIME1-206ENST00000487026 OR14I1A6ND48 311 aa22.6■■□□□ 1.21
LIME1-206ENST00000487026 SMIM24O75264 130 aa22.6■■□□□ 1.21
LIME1-206ENST00000487026 TOXO94900 526 aa22.6■■□□□ 1.21
LIME1-206ENST00000487026 FBXO45P0C2W1 286 aa22.6■■□□□ 1.21
LIME1-206ENST00000487026 TRAF3Q13114 568 aa22.6■■□□□ 1.21
LIME1-206ENST00000487026 RTL6Q6ICC9 239 aa22.6■■□□□ 1.21
LIME1-206ENST00000487026 C14orf79Q96F83 325 aa22.6■■□□□ 1.21
LIME1-206ENST00000487026 JSRP1Q96MG2 331 aaPredicted RBP22.6■■□□□ 1.21
LIME1-206ENST00000487026 TREX2Q9BQ50 279 aaPredicted RBP22.6■■□□□ 1.21
LIME1-206ENST00000487026 NTMT1Q9BV86 223 aa22.6■■□□□ 1.21
LIME1-206ENST00000487026 MRPL1Q9BYD6 325 aaKnown RBP22.6■■□□□ 1.21
LIME1-206ENST00000487026 FAM215AQ9Y5M1 114 aa22.6■■□□□ 1.21
LIME1-206ENST00000487026 CHCHD2Q9Y6H1 151 aaPredicted RBP22.6■■□□□ 1.21
LIME1-206ENST00000487026 IKBKGQ9Y6K9 419 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms