RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 UBQLN2Q9UHD9 624 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 ZNF701M0R085 212 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-210ENST00000487017 PCDH17O14917 1159 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 ITGA5P08648 1049 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 POLR2CP19387 275 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-210ENST00000487017 ZNF267Q14586 743 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-210ENST00000487017 PPP2R2DQ66LE6 453 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 KCTD9Q7L273 389 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 RASGRP3Q8IV61 690 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 ABHD11Q8NFV4 315 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 OR8S1Q8NH09 359 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 OR2L2Q8NH16 312 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 OR52P1PQ8NH57 321 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 CD8B2A6NJW9 211 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 ANHXE9PGG2 379 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 CD8BP10966 210 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 DRD2P14416 443 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 HOXB2P14652 356 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 SOX2P48431 317 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 FAM76BQ5HYJ3 339 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 GLT8D1Q68CQ7 371 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 RAB7BQ96AH8 199 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 EMCNQ9ULC0 261 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 SCN11AQ9UI33 1791 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 CLCA1A8K7I4 914 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 GPR89AB7ZAQ6 455 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 GPR89BP0CG08 455 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 S100A2P29034 98 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 UGT3A2Q3SY77 523 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 LETMD1Q6P1Q0 360 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 ZNF700Q9H0M5 742 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 NENFQ9UMX5 172 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 MYH7BA7E2Y1 1941 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 K7ERQ8 282 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 GPX3P22352 226 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 GABRA3P34903 492 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 INHBCP55103 352 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 POU4F2Q12837 409 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 MANEALQ5VSG8 457 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 TMEM107Q6UX40 140 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 GALNT10Q86SR1 603 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 KLBQ86Z14 1044 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 SLC5A8Q8N695 610 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 BOCQ9BWV1 1114 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 PAQR5Q9NXK6 330 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-210ENST00000487017 EIF3FO00303 357 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-210ENST00000487017 RNF13O43567 381 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 PTTG1O95997 202 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 IQCF3P0C7M6 154 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 LAMP1P11279 417 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 PVALBP20472 110 aaPredicted RBP15.72■□□□□ 0.11
COL7A1-210ENST00000487017 CBLP22681 906 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 ARHGAP40Q5TG30 622 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 OR8K3Q8NH51 312 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 THAP4Q8WY91 577 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 SLC30A3Q99726 388 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 G6PC3Q9BUM1 346 aa15.72■□□□□ 0.11
COL7A1-210ENST00000487017 VNN2O95498 520 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 PFKMP08237 780 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 C1orf94Q6P1W5 598 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 IL17FQ96PD4 163 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 ACTR6Q9GZN1 396 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 DCTP40126 519 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 FOXA1P55317 472 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 EOGTQ5NDL2 527 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 HMGN2P46Q86SG4 172 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 STOML3Q8TAV4 291 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 APIPQ96GX9 242 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 SLC22A31A6NKX4 558 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 BPNT1O95861 308 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 RPL19P84098 196 aaKnown RBP15.71■□□□□ 0.11
COL7A1-210ENST00000487017 OCLNQ16625 522 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 GTDC1Q4AE62 458 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 TMEM69Q5SWH9 247 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 LRRC69Q6ZNQ3 347 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 TMEM151AQ8N4L1 468 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 PAPD5Q8NDF8 572 aaKnown RBP15.71■□□□□ 0.11
COL7A1-210ENST00000487017 OR4K17Q8NGC6 315 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 INPP5KQ9BT40 448 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 ZNF471Q9BX82 626 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-210ENST00000487017 GRXCR2A6NFK2 248 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 M0R036 132 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 MRPS14O60783 128 aaKnown RBP15.71■□□□□ 0.11
COL7A1-210ENST00000487017 RBBP9O75884 186 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 NDUFV2P19404 249 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 DENND6BQ8NEG7 585 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 OR51A7Q8NH64 312 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 CD200R1Q8TD46 325 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 CPNE2Q96FN4 548 aaPredicted RBP15.71■□□□□ 0.11
COL7A1-210ENST00000487017 ZNF597Q96LX8 424 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 SLC12A9Q9BXP2 914 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 ZNF350Q9GZX5 532 aa15.71■□□□□ 0.11
COL7A1-210ENST00000487017 TIAM2Q8IVF5 1701 aa15.71■□□□□ 0.1
COL7A1-210ENST00000487017 TEX13DA0A0J9YY54 714 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-210ENST00000487017 OR2B3O76000 313 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 H2AFB2P0C5Z0 115 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 ZNF16P17020 682 aaPredicted RBP15.7■□□□□ 0.1
COL7A1-210ENST00000487017 CAPZA1P52907 286 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 CDK5R2Q13319 367 aa15.7■□□□□ 0.1
COL7A1-210ENST00000487017 PROX2Q3B8N5 592 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms