RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 RPL15P61313 204 aaKnown RBP3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 ABRQ12979 859 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 PRKAA1Q13131 559 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 XRCC4Q13426 336 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 NCF4Q15080 339 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 SLC18A3Q16572 532 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 GFOD2Q3B7J2 385 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 PRR30Q53SZ7 412 aaPredicted RBP3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 ZRANB3Q5FWF4 1079 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 ZNF789Q5FWF6 425 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 SIRPB2Q5JXA9 342 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 FAM182AQ5T1J6 154 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 GPRC6AQ5T6X5 926 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 VWA5B1Q5TIE3 1220 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 LRRC38Q5VT99 294 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 DCAF12L2Q5VW00 463 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 ATG9BQ674R7 924 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 KDELC1Q6UW63 502 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 FAM151BQ6UXP7 276 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 RAB43Q86YS6 212 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 TICAM1Q8IUC6 712 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 SYTL1Q8IYJ3 562 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 IQCKQ8N0W5 287 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 SLC34A3Q8N130 599 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 SRFBP1Q8NEF9 429 aaKnown RBP3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 ACVR1CQ8NER5 493 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 OR4E2Q8NGC2 313 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 OR2L2Q8NH16 312 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 OR1L3Q8NH93 324 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 CTNNBL1Q8WYA6 563 aaPredicted RBP3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 SNRNP40Q96DI7 357 aaKnown RBP3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 C19orf60Q96EN9 201 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 LINC00615Q96LM1 132 aaPredicted RBP3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 FER1L6-AS2Q96M78 137 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 C12orf66Q96MD2 445 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 VAT1Q99536 393 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 BARD1Q99728 777 aaKnown RBP3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 C17orf62Q9BQA9 187 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 CCM2Q9BSQ5 444 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 ANP32EQ9BTT0 268 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 PITPNM3Q9BZ71 974 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 CHRNA10Q9GZZ6 450 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 WWP1Q9H0M0 922 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 SRMSQ9H3Y6 488 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 TFB2MQ9H5Q4 396 aaKnown RBP3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 ACTR5Q9H9F9 607 aaPredicted RBP3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 UGT1A7Q9HAW7 530 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 UGT1A10Q9HAW8 530 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 UGT1A8Q9HAW9 530 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 PNRC2Q9NPJ4 139 aaKnown RBP3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 IMP3Q9NV31 184 aaKnown RBP3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 ASF1BQ9NVP2 202 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 SMOXQ9NWM0 555 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 SOHLH2Q9NX45 425 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 POMT2Q9UKY4 750 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 ICAM5Q9UMF0 924 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 PADI2Q9Y2J8 665 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 UBE2J1Q9Y385 318 aaPredicted RBP3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 PKP3Q9Y446 797 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 HEBP2Q9Y5Z4 205 aa3.78□□□□□ -1.8
SNRNP40-205ENST00000486941 ANKRD17O75179 2603 aaKnown RBP3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 F8P00451 2351 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 GTF3C1Q12789 2109 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 APCP25054 2843 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 CCDC168Q8NDH2 2452 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 MED13LQ71F56 2210 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 ANKUB1A6NFN9 424 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 C5orf60A6NFR6 353 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 C2orf81A6NN90 581 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 TMEM150CB9EJG8 249 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 E7EQ34 232 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 BTN3A3O00478 584 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 PEX12O00623 359 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 STX7O15400 261 aaKnown RBP3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 ZNF749O43361 778 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 SRP72O76094 671 aaKnown RBP3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 LCA5LO95447 670 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 ALPPP05187 535 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 POLBP06746 335 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 RALBP11234 206 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 POLR2CP19387 275 aaPredicted RBP3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 CYP2A7P20853 494 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 PBLDP30039 288 aaPredicted RBP3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 AKT1P31749 480 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 CA5AP35218 305 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 CDKN2BP42772 138 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 SLC1A1P43005 524 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 STT3AP46977 705 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 CD151P48509 253 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 UBASH3AP57075 661 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 WASHC5Q12768 1159 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 TFDP2Q14188 446 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 KRT33BQ14525 404 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 MESDQ14696 234 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 TAF1AQ15573 450 aaPredicted RBP3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 SLC1A5Q15758 541 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 TAZQ16635 292 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 ASTE1Q2TB18 679 aaPredicted RBP3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 BCL7AQ4VC05 210 aa3.77□□□□□ -1.81
SNRNP40-205ENST00000486941 ODF2Q5BJF6 829 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms