RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 ARHGEF9O43307 516 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 SLC28A2O43868 658 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 OR3A3P47888 321 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 MANFP55145 182 aaKnown RBP11.76□□□□□ -0.53
HSPG2-211ENST00000486901 TBPL1P62380 186 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 FABP5Q01469 135 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 TEAD4Q15561 434 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 CRB2Q5IJ48 1285 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 DDI2Q5TDH0 399 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 TRIM40Q6P9F5 258 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 TMEM220Q6QAJ8 160 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 TPRG1Q6ZUI0 275 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 LAPTM4BQ86VI4 370 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 TRAPPC5Q8IUR0 188 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 SLC37A3Q8NCC5 494 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 GPR32P1Q8NGA4 272 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 KATNB1Q9BVA0 655 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 TTLL2Q9BWV7 592 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 TAPBPLQ9BX59 468 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 KLF16Q9BXK1 252 aaPredicted RBP11.76□□□□□ -0.53
HSPG2-211ENST00000486901 CDCA4Q9BXL8 241 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 REEP4Q9H6H4 257 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 SLAMF7Q9NQ25 335 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 EVA1BQ9NVM1 165 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 NKIRAS2Q9NYR9 191 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 ZNF282Q9UDV7 671 aaPredicted RBP11.76□□□□□ -0.53
HSPG2-211ENST00000486901 NTNG1Q9Y2I2 539 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 OR51B4Q9Y5P0 310 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 TRBV5-4A0A0C4DH59 114 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 ZNF670-ZNF695F2Z2N8 137 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 UGT2B17O75795 530 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 C8GP07360 202 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 METAP1P53582 386 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 DSTNP60981 165 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 POU4F3Q15319 338 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 TCTN1Q2MV58 587 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 ZNF750Q32MQ0 723 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 BCL2L15Q5TBC7 163 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 PXDC1Q5TGL8 231 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 TCTN3Q6NUS6 607 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 RNF180Q86T96 592 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 ALG14Q96F25 216 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 RAD9AQ99638 391 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 SGIP1Q9BQI5 828 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 ASAH2Q9NR71 780 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 SEC14L3Q9UDX4 400 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 CENPBD1B2RD01 187 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 PAHP00439 452 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 IGHA2P01877 340 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 URODP06132 367 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 EPHX1P07099 455 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 C8orf89P0DMQ9 161 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 MAP2K3P46734 347 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 SLC16A1P53985 500 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 GPR33Q49SQ1 333 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 ZNF697Q5TEC3 545 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 TTC23LQ6PF05 361 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 ADCK2Q7Z695 626 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 OR52I1Q8NGK6 324 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 C16orf78Q8WTQ4 265 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 ASZ1Q8WWH4 475 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 F2RL3Q96RI0 385 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 PPIL3Q9H2H8 161 aaKnown RBP11.76□□□□□ -0.53
HSPG2-211ENST00000486901 NARFLQ9H6Q4 476 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 SPATA6Q9NWH7 488 aaPredicted RBP11.76□□□□□ -0.53
HSPG2-211ENST00000486901 KCNE2Q9Y6J6 123 aa11.76□□□□□ -0.53
HSPG2-211ENST00000486901 SCN2AQ99250 2005 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 LOC105369274A0A096LPK9 316 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 LANCL1O43813 399 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 GABRR2P28476 465 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 ZNF763Q0D2J5 394 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 SLC35F1Q5T1Q4 408 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 IDNKQ5T6J7 187 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 SLX4IPQ5VYV7 408 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 SYT9Q86SS6 491 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 FAM9CQ8IZT9 166 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 OR4N4Q8N0Y3 316 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 PIGKQ92643 395 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 SCRN2Q96FV2 425 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 YIPF1Q9Y548 306 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 RP1L1Q8IWN7 2480 aaPredicted RBP11.75□□□□□ -0.53
HSPG2-211ENST00000486901 LZTS3O60299 673 aaPredicted RBP11.75□□□□□ -0.53
HSPG2-211ENST00000486901 SPINT3P49223 89 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 MRPL28Q13084 256 aaKnown RBP11.75□□□□□ -0.53
HSPG2-211ENST00000486901 EIF4HQ15056 248 aaKnown RBP11.75□□□□□ -0.53
HSPG2-211ENST00000486901 LCN1P1Q5VSP4 162 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 ANXA8L1Q5VT79 327 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 MED27Q6P2C8 311 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 MARCH9Q86YJ5 346 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 TMEM145Q8NBT3 493 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 OR52N2Q8NGI0 321 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 ZNF480Q8WV37 535 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 MRPL15Q9P015 296 aaKnown RBP11.75□□□□□ -0.53
HSPG2-211ENST00000486901 SEC14L4Q9UDX3 406 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 CACNA1IQ9P0X4 2223 aa11.75□□□□□ -0.53
HSPG2-211ENST00000486901 NEDD8-MDP1E9PL57 170 aa11.74□□□□□ -0.53
HSPG2-211ENST00000486901 POLR1CO15160 346 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-211ENST00000486901 MYL12AP19105 171 aa11.74□□□□□ -0.53
HSPG2-211ENST00000486901 ELAVL4P26378 380 aaKnown RBP11.74□□□□□ -0.53
HSPG2-211ENST00000486901 HLA-FP30511 346 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms