RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 METTL6Q8TCB7 284 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 FAIM2Q9BWQ8 316 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 MID2Q9UJV3 735 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 MYO7BQ6PIF6 2116 aa11.95□□□□□ -0.5
CHMP3-208ENST00000486404 GNG14A0A1W2PPG7 69 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 TMEM200CA6NKL6 621 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 CCL21O00585 134 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 CDC40O60508 579 aaKnown RBP eCLIP11.94□□□□□ -0.5
CHMP3-208ENST00000486404 ZG16O60844 167 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 ULK1O75385 1050 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 IGKV3-11P04433 115 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 P04436 131 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 SLC35E2P0CK97 266 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 ESRRAP11474 423 aaPredicted RBP11.94□□□□□ -0.5
CHMP3-208ENST00000486404 CA7P43166 264 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 ALDH9A1P49189 494 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 NAA20P61599 178 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 GALNT1Q10472 559 aaPredicted RBP11.94□□□□□ -0.5
CHMP3-208ENST00000486404 ASPHQ12797 758 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 HLA-DQA1Q5Y7H0 255 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 ZYG11AQ6WRX3 759 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 GK5Q6ZS86 529 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 MDGA2Q7Z553 956 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 GBP7Q8N8V2 638 aaPredicted RBP11.94□□□□□ -0.5
CHMP3-208ENST00000486404 OR4K14Q8NGD5 310 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 RDH11Q8TC12 318 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 DOK4Q8TEW6 326 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 KLHL29Q96CT2 875 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 ANKZF1Q9H8Y5 726 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 MID1IP1Q9NPA3 183 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 PFDN4Q9NQP4 134 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 SACM1LQ9NTJ5 587 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 VPS29Q9UBQ0 182 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 EMCNQ9ULC0 261 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 GRID1Q9ULK0 1009 aa11.94□□□□□ -0.5
CHMP3-208ENST00000486404 GTF3C1Q12789 2109 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 TLDC2A0PJX2 215 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 C1orf226A1L170 272 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 WIPF3A6NGB9 483 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 OR6C76A6NM76 312 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 FOXO6A8MYZ6 492 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 G3V3Y1 287 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 HRKO00198 91 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 ASNA1O43681 348 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 PCDH7O60245 1069 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 ERAL1O75616 437 aaKnown RBP11.93□□□□□ -0.5
CHMP3-208ENST00000486404 PROCP04070 461 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 CPMP14384 443 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 KRT4P19013 534 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 NT5EP21589 574 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 GALNSP34059 522 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 VSNL1P62760 191 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 HSF1Q00613 529 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 ACSM2AQ08AH3 577 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 MPEG1Q2M385 716 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 SPIN4Q56A73 249 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 ACSM2BQ68CK6 577 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 DGAT2L6Q6ZPD8 337 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 FAM47EQ6ZV65 393 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 SIAH3Q8IW03 269 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 TAGAPQ8N103 731 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 EID3Q8N140 333 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 C4orf33Q8N1A6 199 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 GOLM1Q8NBJ4 401 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 FAM13CQ8NE31 585 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 AGAP11Q8TF27 550 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 RELTQ969Z4 430 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 SGCZQ96LD1 299 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 KCNA7Q96RP8 456 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 WWTR1Q9GZV5 400 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 GSTO2Q9H4Y5 243 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 TINAGQ9UJW2 476 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 ZNF225Q9UK10 706 aa11.93□□□□□ -0.5
CHMP3-208ENST00000486404 WASHC1A8K0Z3 465 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 FAM166BA8MTA8 275 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 G3V2L1 256 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 H3BQF6 201 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 PGRMC2O15173 223 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 HS6ST1O60243 411 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 PLIN3O60664 434 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 SLU7O95391 586 aaKnown RBP11.92□□□□□ -0.5
CHMP3-208ENST00000486404 CLDN1O95832 211 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 PTGER1P34995 402 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 CRHR1P34998 444 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 HTR6P50406 440 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 XKP51811 444 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 SLC37A1P57057 533 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 TRA2BP62995 288 aaKnown RBP11.92□□□□□ -0.5
CHMP3-208ENST00000486404 TBL3Q12788 808 aaKnown RBP11.92□□□□□ -0.5
CHMP3-208ENST00000486404 EBPQ15125 230 aaKnown RBP11.92□□□□□ -0.5
CHMP3-208ENST00000486404 C3AR1Q16581 482 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 IMPG1Q17R60 797 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 ZNF750Q32MQ0 723 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 RNFT1Q5M7Z0 435 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 SPDYAQ5MJ70 313 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 FAM219BQ5XKK7 198 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 HIST2H2BCQ6DN03 193 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 SLC48A1Q6P1K1 146 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 RPTNQ6XPR3 784 aa11.92□□□□□ -0.5
CHMP3-208ENST00000486404 BNC2Q6ZN30 1099 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms