RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.83□□□□□ -1
TMEM39A-208ENST00000486159 LRRC56Q8IYG6 542 aaPredicted RBP8.83□□□□□ -1
TMEM39A-208ENST00000486159 CSNK1A1LQ8N752 337 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 GOLM1Q8NBJ4 401 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 ST6GALNAC3Q8NDV1 305 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 OR1N1Q8NGS0 311 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 OR2T11Q8NH01 316 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 ZNF480Q8WV37 535 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 SPDL1Q96EA4 605 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 WDR34Q96EX3 536 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 MMABQ96EY8 250 aaPredicted RBP8.83□□□□□ -1
TMEM39A-208ENST00000486159 CMTM7Q96FZ5 175 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 CDK15Q96Q40 435 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 OR2A5Q96R48 311 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 PCBD2Q9H0N5 130 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 BRF2Q9HAW0 419 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 LRTM1Q9HBL6 345 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 MRPS30Q9NP92 439 aaKnown RBP8.83□□□□□ -1
TMEM39A-208ENST00000486159 SEMA3GQ9NS98 782 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 NMRK1Q9NWW6 199 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 C1orf109Q9NX04 203 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 TRPC4Q9UBN4 977 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 SUCOQ9UBS9 1254 aaKnown RBP8.83□□□□□ -1
TMEM39A-208ENST00000486159 ZNF282Q9UDV7 671 aaPredicted RBP8.83□□□□□ -1
TMEM39A-208ENST00000486159 RNF11Q9Y3C5 154 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 TSC22D4Q9Y3Q8 395 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 PCDHGA11Q9Y5H2 935 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 KCNE2Q9Y6J6 123 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 CRYBG3Q68DQ2 2970 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 SCN2AQ99250 2005 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 LRRK2Q5S007 2527 aa8.83□□□□□ -1
TMEM39A-208ENST00000486159 IGLV3-12A0A075B6K2 115 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 IGHV1-45A0A0A0MS14 117 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 CCDC154A6NI56 674 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 IDSB3KWA1 339 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 E7ENX8 843 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 H0YIV9 168 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 H7BY64 318 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 NR5A2O00482 541 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 MAN1A2O60476 641 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 PRMT3O60678 531 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 BCAS2O75934 225 aaPredicted RBP8.82□□□□□ -1
TMEM39A-208ENST00000486159 IGHEP01854 428 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 IL6P05231 212 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 MST1P26927 711 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 GRNP28799 593 aaKnown RBP8.82□□□□□ -1
TMEM39A-208ENST00000486159 TSFMP43897 325 aaKnown RBP8.82□□□□□ -1
TMEM39A-208ENST00000486159 HTR6P50406 440 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 HNRNPFP52597 415 aaKnown RBP8.82□□□□□ -1
TMEM39A-208ENST00000486159 CLNS1AP54105 237 aaKnown RBP8.82□□□□□ -1
TMEM39A-208ENST00000486159 DIO3P55073 304 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 PMP22Q01453 160 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 TAP2Q03519 686 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 OCA2Q04671 838 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 PRDX1Q06830 199 aaKnown RBP8.82□□□□□ -1
TMEM39A-208ENST00000486159 BNIP2Q12982 314 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 CHIT1Q13231 466 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 ELOAQ14241 798 aaKnown RBP8.82□□□□□ -1
TMEM39A-208ENST00000486159 TRIM25Q14258 630 aaKnown RBP8.82□□□□□ -1
TMEM39A-208ENST00000486159 PCOLCEQ15113 449 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 RCN1Q15293 331 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 ZXDCQ2QGD7 858 aaPredicted RBP8.82□□□□□ -1
TMEM39A-208ENST00000486159 PAGE2BQ5JRK9 111 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 WLSQ5T9L3 541 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 IRAK1BP1Q5VVH5 260 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 YOD1Q5VVQ6 348 aaPredicted RBP8.82□□□□□ -1
TMEM39A-208ENST00000486159 IL23RQ5VWK5 629 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 FRG2Q64ET8 278 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 ICE2Q659A1 982 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 ZNF324BQ6AW86 544 aaPredicted RBP8.82□□□□□ -1
TMEM39A-208ENST00000486159 FCRLBQ6BAA4 426 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 GRHL2Q6ISB3 625 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 CYP20A1Q6UW02 462 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 ISLR2Q6UXK2 745 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 MBOAT1Q6ZNC8 495 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 MSANTD1Q6ZTZ1 278 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 LANCL3Q6ZV70 420 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 FJX1Q86VR8 437 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 ZC3H7AQ8IWR0 971 aaKnown RBP8.82□□□□□ -1
TMEM39A-208ENST00000486159 RAB42Q8N4Z0 105 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 DPP10Q8N608 796 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 OR9A4Q8NGU2 314 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 FAR1Q8WVX9 515 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 SELENOMQ8WWX9 145 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 SMPDL3AQ92484 453 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 TM9SF4Q92544 642 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 POP5Q969H6 163 aaKnown RBP8.82□□□□□ -1
TMEM39A-208ENST00000486159 UBE2E3Q969T4 207 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 ASB9Q96DX5 294 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 CLPTM1LQ96KA5 538 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 PRAP1Q96NZ9 151 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 FRG2BQ96QU4 278 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 NPAS2Q99743 824 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 GPATCH1Q9BRR8 931 aaKnown RBP8.82□□□□□ -1
TMEM39A-208ENST00000486159 HAUS8Q9BT25 410 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 EFCAB11Q9BUY7 163 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 SGPP1Q9BX95 441 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 RAB11FIP5Q9BXF6 653 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 TRIM15Q9C019 465 aa8.82□□□□□ -1
TMEM39A-208ENST00000486159 PITHD1Q9GZP4 211 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms