RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 MANFP55145 182 aaKnown RBP16.45■□□□□ 0.22
CHMP3-207ENST00000485465 OR4D2P58180 307 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 PLIN5Q00G26 463 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 CYLC2Q14093 348 aaPredicted RBP16.45■□□□□ 0.22
CHMP3-207ENST00000485465 MLC1Q15049 377 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 TLR1Q15399 786 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 TRPM8Q7Z2W7 1104 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 VASH2Q86V25 355 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 ANKRD46Q86W74 232 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 SNX32Q86XE0 403 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 ZNF248Q8NDW4 579 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 ZFP28Q8NHY6 868 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 RP9Q8TA86 221 aaKnown RBP16.45■□□□□ 0.22
CHMP3-207ENST00000485465 SNIP1Q8TAD8 396 aaKnown RBP16.45■□□□□ 0.22
CHMP3-207ENST00000485465 OR5P2Q8WZ92 322 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 RBM18Q96H35 190 aaKnown RBP16.45■□□□□ 0.22
CHMP3-207ENST00000485465 CCDC86Q9H6F5 360 aaKnown RBP16.45■□□□□ 0.22
CHMP3-207ENST00000485465 PNO1Q9NRX1 252 aaKnown RBP16.45■□□□□ 0.22
CHMP3-207ENST00000485465 WDR70Q9NW82 654 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.45■□□□□ 0.22
CHMP3-207ENST00000485465 C19orf25Q9UFG5 118 aaPredicted RBP16.45■□□□□ 0.22
CHMP3-207ENST00000485465 BTNL2Q9UIR0 455 aa16.45■□□□□ 0.22
CHMP3-207ENST00000485465 MRPS18BQ9Y676 258 aaKnown RBP16.45■□□□□ 0.22
CHMP3-207ENST00000485465 MED19A0JLT2 244 aaPredicted RBP16.44■□□□□ 0.22
CHMP3-207ENST00000485465 C6orf47O95873 294 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 NT5EP21589 574 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 PRDX6P30041 224 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 GALNSP34059 522 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 LRRC74AQ0VAA2 488 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 KRT72Q14CN4 511 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 MAPKAPK3Q16644 382 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 DGAT2L6Q6ZPD8 337 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 ERMP1Q7Z2K6 904 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 ZNF551Q7Z340 670 aaPredicted RBP16.44■□□□□ 0.22
CHMP3-207ENST00000485465 CPEB2Q7Z5Q1 589 aaKnown RBP16.44■□□□□ 0.22
CHMP3-207ENST00000485465 CLECL1Q8IZS7 167 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 POU5F2Q8N7G0 328 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 OR9A2Q8NGT5 310 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 KCNE4Q8WWG9 221 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 CMTM5Q96DZ9 223 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 NAF1Q96HR8 494 aaKnown RBP16.44■□□□□ 0.22
CHMP3-207ENST00000485465 CCDC115Q96NT0 180 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 MESP1Q9BRJ9 268 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 RMND5AQ9H871 391 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 ADAP2Q9NPF8 381 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 NDUFAF1Q9Y375 327 aa16.44■□□□□ 0.22
CHMP3-207ENST00000485465 SCN2AQ99250 2005 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 SPTBN2O15020 2390 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 LOC102723996A0A087X1L8 192 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 CCT8L1PA6NM43 557 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 A8MUA0 341 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 ANGPT2O15123 496 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 CREG1O75629 220 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 TNNI3P19429 210 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 OTX2P32243 289 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 PTGER1P34995 402 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 HSPB3Q12988 150 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 STX5Q13190 355 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 ELAVL1Q15717 326 aaKnown RBP16.43■□□□□ 0.22
CHMP3-207ENST00000485465 LTB4RQ15722 352 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 SFT2D3Q587I9 215 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 SLC2A7Q6PXP3 512 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 PPP1R32Q7Z5V6 425 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 ADCY4Q8NFM4 1077 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 PTPMT1Q8WUK0 201 aaPredicted RBP16.43■□□□□ 0.22
CHMP3-207ENST00000485465 GTF2H4Q92759 462 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 RIT1Q92963 219 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 NACC2Q96BF6 587 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 C8orf44Q96CB5 159 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 ITCHQ96J02 903 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 TMEM121BQ9BXQ6 578 aaPredicted RBP16.43■□□□□ 0.22
CHMP3-207ENST00000485465 DPH1Q9BZG8 443 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 CXorf21Q9HAI6 301 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 SERHLQ9NQF3 203 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 ARL8BQ9NVJ2 186 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 LEF1Q9UJU2 399 aaPredicted RBP16.43■□□□□ 0.22
CHMP3-207ENST00000485465 PCDHGB4Q9UN71 923 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 HS3ST3B1Q9Y662 390 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 AKAP13Q12802 2813 aa16.43■□□□□ 0.22
CHMP3-207ENST00000485465 IGHV3-20A0A0C4DH32 117 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 BBIP1A8MTZ0 92 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 C17orf105B2RV13 164 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 FBP2O00757 339 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 SOCS6O14544 535 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 CPSF4O95639 269 aaKnown RBP16.42■□□□□ 0.22
CHMP3-207ENST00000485465 CAPNS1P04632 268 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 GPC1P35052 558 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 HBA1P69905 142 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 GABPB1Q06547 395 aaPredicted RBP16.42■□□□□ 0.22
CHMP3-207ENST00000485465 MGAT2Q10469 447 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 MAP4K2Q12851 820 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 SRSF6Q13247 344 aaKnown RBP16.42■□□□□ 0.22
CHMP3-207ENST00000485465 IL10RAQ13651 578 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 PRICKLE4Q2TBC4 344 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 ZNF628Q5EBL2 1059 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 PAGE3Q5JUK9 113 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 RETREG3Q86VR2 466 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 OR4A15Q8NGL6 344 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 ZNF675Q8TD23 568 aa16.42■□□□□ 0.22
CHMP3-207ENST00000485465 INPP5KQ9BT40 448 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms