RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 BUD31P41223 144 aaPredicted RBP17.7■□□□□ 0.42
COL27A1-205ENST00000485397 SNTB1Q13884 538 aaKnown RBP17.7■□□□□ 0.42
COL27A1-205ENST00000485397 SETDB1Q15047 1291 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 PFKFB4Q16877 469 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 LIPJQ5W064 366 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 ZDHHC24Q6UX98 284 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 RNF111Q6ZNA4 994 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 SLC29A4Q7RTT9 530 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 FBXW8Q8N3Y1 598 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 MRRFQ96E11 262 aaKnown RBP17.7■□□□□ 0.42
COL27A1-205ENST00000485397 JSRP1Q96MG2 331 aaPredicted RBP17.7■□□□□ 0.42
COL27A1-205ENST00000485397 WWTR1Q9GZV5 400 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 SLC6A15Q9H2J7 730 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.7■□□□□ 0.424e-15■■■□□ 14.9
COL27A1-205ENST00000485397 CNOT11Q9UKZ1 510 aaKnown RBP17.7■□□□□ 0.42
COL27A1-205ENST00000485397 TSC22D4Q9Y3Q8 395 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 L3MBTL1Q9Y468 752 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 PCDHGA11Q9Y5H2 935 aa17.7■□□□□ 0.42
COL27A1-205ENST00000485397 CHCHD2Q9Y6H1 151 aaPredicted RBP17.7■□□□□ 0.42
COL27A1-205ENST00000485397 CELSR1Q9NYQ6 3014 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 A0A0A6YYD5 115 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 SYCE1LA8MT33 242 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 ZWINTO95229 277 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 C2P06681 752 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 GFAPP14136 432 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 PTX3P26022 381 aaPredicted RBP17.69■□□□□ 0.42
COL27A1-205ENST00000485397 SERPINB3P29508 390 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 TRPC1P48995 793 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 ART1P52961 327 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 SLC37A1P57057 533 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 EBPQ15125 230 aaKnown RBP17.69■□□□□ 0.42
COL27A1-205ENST00000485397 CPSF6Q16630 551 aaKnown RBP eCLIP17.69■□□□□ 0.42
COL27A1-205ENST00000485397 SPRED3Q2MJR0 410 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 MROH9Q5TGP6 573 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 TMEM64Q6YI46 380 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 WDR53Q7Z5U6 358 aaPredicted RBP17.69■□□□□ 0.42
COL27A1-205ENST00000485397 LRRC25Q8N386 305 aaPredicted RBP17.69■□□□□ 0.42
COL27A1-205ENST00000485397 RHEBL1Q8TAI7 183 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 RIT1Q92963 219 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 PELOQ9BRX2 385 aaKnown RBP17.69■□□□□ 0.42
COL27A1-205ENST00000485397 LYARQ9NX58 379 aaKnown RBP17.69■□□□□ 0.42
COL27A1-205ENST00000485397 CNIH4Q9P003 139 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 UTP11Q9Y3A2 253 aaKnown RBP17.69■□□□□ 0.42
COL27A1-205ENST00000485397 RNF11Q9Y3C5 154 aa17.69■□□□□ 0.42
COL27A1-205ENST00000485397 A0A087X1B8 175 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 A0A1W2PS29 197 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 HMX2A2RU54 273 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 H0YIV9 168 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 AIFM1O95831 613 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 GBAP04062 536 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 FAM58BPP0C7Q3 252 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 NR2F6P10588 404 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 GABRA1P14867 456 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 DNAJA1P31689 397 aaKnown RBP17.68■□□□□ 0.42
COL27A1-205ENST00000485397 PIK3CGP48736 1102 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 NEK2P51955 445 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 ARFIP1P53367 373 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 GUCY2DQ02846 1103 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 CAV1Q03135 178 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 TBL3Q12788 808 aaKnown RBP17.68■□□□□ 0.42
COL27A1-205ENST00000485397 NAB1Q13506 487 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 RIPPLY2Q5TAB7 128 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 CYP20A1Q6UW02 462 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 SEM1Q6ZVN7 128 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 GOLGA7Q7Z5G4 137 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 DND1Q8IYX4 353 aaKnown RBP17.68■□□□□ 0.42
COL27A1-205ENST00000485397 NEIL3Q8TAT5 605 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 DOHHQ9BU89 302 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 DDX31Q9H8H2 851 aaKnown RBP17.68■□□□□ 0.42
COL27A1-205ENST00000485397 ACKR4Q9NPB9 350 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 NINQ8N4C6 2090 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 NCKAP5O14513 1909 aa17.68■□□□□ 0.42
COL27A1-205ENST00000485397 PGRMC2O15173 223 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 SIX3O95343 332 aaPredicted RBP17.67■□□□□ 0.42
COL27A1-205ENST00000485397 SSTR4P31391 388 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 ALDH18A1P54886 795 aaKnown RBP17.67■□□□□ 0.42
COL27A1-205ENST00000485397 PHEXP78562 749 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 GTF2H2Q13888 395 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 PCBP2Q15366 365 aaKnown RBP eCLIP17.67■□□□□ 0.422e-13■■□□□ 12.4
COL27A1-205ENST00000485397 NTRK2Q16620 822 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 FAM83EQ2M2I3 478 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 SLC25A35Q3KQZ1 300 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 GTF2H2CQ6P1K8 395 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 ARSKQ6UWY0 536 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 ULK2Q8IYT8 1036 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 LIX1Q8N485 282 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 ZNF441Q8N8Z8 693 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 WDR20Q8TBZ3 569 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 REPS1Q96D71 796 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 GPR78Q96P69 363 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 IPPKQ9H8X2 491 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 SLC24A3Q9HC58 644 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 SNX15Q9NRS6 342 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 QPCTLQ9NXS2 382 aa17.67■□□□□ 0.42
COL27A1-205ENST00000485397 A0A096LPK6 155 aa17.66■□□□□ 0.42
COL27A1-205ENST00000485397 OR6C76A6NM76 312 aa17.66■□□□□ 0.42
COL27A1-205ENST00000485397 KDM4EB2RXH2 506 aaPredicted RBP17.66■□□□□ 0.42
COL27A1-205ENST00000485397 SLC35E2P0CK97 266 aa17.66■□□□□ 0.42
COL27A1-205ENST00000485397 CD1EP15812 388 aa17.66■□□□□ 0.42
COL27A1-205ENST00000485397 CUL3Q13618 768 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms