RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 CPN2P22792 545 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 UQCRC1P31930 480 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 HSPA7P48741 367 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 PLTPP55058 493 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 KCNJ2P63252 427 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 PLIN5Q00G26 463 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 IRF8Q02556 426 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 CRYZQ08257 329 aaKnown RBP11.96□□□□□ -0.49
HDAC6-227ENST00000485102 CHIT1Q13231 466 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 SPRED3Q2MJR0 410 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 DEPDC1Q5TB30 811 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 PAMR1Q6UXH9 720 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 CYS1Q717R9 158 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 KIF18BQ86Y91 864 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 LACC1Q8IV20 430 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 PM20D2Q8IYS1 436 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 ST13P4Q8IZP2 240 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-227ENST00000485102 MMP21Q8N119 569 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 NAXEQ8NCW5 288 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 UBXN10Q96LJ8 280 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 PWWP2AQ96N64 755 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 DGAT2Q96PD7 388 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 FMO2Q99518 471 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 PELOQ9BRX2 385 aaKnown RBP11.96□□□□□ -0.49
HDAC6-227ENST00000485102 PRDM14Q9GZV8 571 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 DPH5Q9H2P9 285 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 RPF2Q9H7B2 306 aaKnown RBP11.96□□□□□ -0.49
HDAC6-227ENST00000485102 ADGRE2Q9UHX3 823 aa11.96□□□□□ -0.49
HDAC6-227ENST00000485102 DOCK7Q96N67 2140 aa11.96□□□□□ -0.5
HDAC6-227ENST00000485102 JMJD1CQ15652 2540 aa11.96□□□□□ -0.5
HDAC6-227ENST00000485102 OR6C76A6NM76 312 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 RTCAO00442 366 aaKnown RBP11.95□□□□□ -0.5
HDAC6-227ENST00000485102 IL18BPO95998 194 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 IL2RAP01589 272 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 RAF1P04049 648 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 CCDC166P0CW27 439 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 CD1DP15813 335 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 BMP5P22003 454 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 PHBP35232 272 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 MSH2P43246 934 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 DGKQP52824 942 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 SLC12A2P55011 1212 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 SORDQ00796 357 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 ID2Q02363 134 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 DUSP8Q13202 625 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 ACSF3Q4G176 576 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-227ENST00000485102 NHSL2Q5HYW2 709 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 KHDRBS2Q5VWX1 349 aaKnown RBP11.95□□□□□ -0.5
HDAC6-227ENST00000485102 VASNQ6EMK4 673 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 OR4C11Q6IEV9 310 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 MED27Q6P2C8 311 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 LRRC70Q7Z2Q7 622 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 BIVMQ86UB2 503 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 RELL1Q8IUW5 271 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 ZCCHC7Q8N3Z6 543 aaKnown RBP11.95□□□□□ -0.5
HDAC6-227ENST00000485102 LIX1Q8N485 282 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 SNX31Q8N9S9 440 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 NOA1Q8NC60 698 aaKnown RBP11.95□□□□□ -0.5
HDAC6-227ENST00000485102 TNIP2Q8NFZ5 429 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 OR7G3Q8NG95 312 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 OR10G3Q8NGC4 313 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 PYROXD1Q8WU10 500 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 SREK1Q8WXA9 508 aaKnown RBP11.95□□□□□ -0.5
HDAC6-227ENST00000485102 CDKL2Q92772 493 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 TP53INP1Q96A56 240 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 ESAMQ96AP7 390 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 NTNG2Q96CW9 530 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 TSPAN17Q96FV3 270 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 CMTM7Q96FZ5 175 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 SECISBP2Q96T21 854 aaKnown RBP11.95□□□□□ -0.5
HDAC6-227ENST00000485102 TIMP4Q99727 224 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 CD244Q9BZW8 370 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 SLC6A15Q9H2J7 730 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 UBQLN3Q9H347 655 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 GSX1Q9H4S2 264 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-227ENST00000485102 DMRT3Q9NQL9 472 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 JKAMPQ9P055 326 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 FETUBQ9UGM5 382 aa11.95□□□□□ -0.5
HDAC6-227ENST00000485102 MED12Q93074 2177 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 IQANK1A0A1B0GTG1 560 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 CD8B2A6NJW9 211 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 CAPN14A8MX76 684 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 HRKO00198 91 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 SNX4O95219 450 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 ATE1O95260 518 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 GPR75O95800 540 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 TGFB1P01137 390 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 HPNP05981 417 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 ALOX15P16050 662 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-227ENST00000485102 HOXC12P31275 282 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 TLX1P31314 330 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-227ENST00000485102 PIK3CBP42338 1070 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 SSR2P43308 183 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 ZNF136P52737 540 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 SLC37A1P57057 533 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 TNFRSF17Q02223 184 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 PDIA2Q13087 525 aaKnown RBP11.94□□□□□ -0.5
HDAC6-227ENST00000485102 SLAMF1Q13291 335 aa11.94□□□□□ -0.5
HDAC6-227ENST00000485102 SNTB1Q13884 538 aaKnown RBP11.94□□□□□ -0.5
HDAC6-227ENST00000485102 EBPQ15125 230 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms