RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 ZNF169Q14929 603 aaPredicted RBP14.78□□□□□ -0.04
UPF3A-208ENST00000484246 NR6A1Q15406 480 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 PLEKHN1Q494U1 663 aaPredicted RBP14.78□□□□□ -0.04
UPF3A-208ENST00000484246 FAM71E1Q6IPT2 247 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 HSDL2Q6YN16 418 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 DGAT2L6Q6ZPD8 337 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 PRICKLE2Q7Z3G6 844 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 MMP21Q8N119 569 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 ANKRD42Q8N9B4 389 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 NUBPLQ8TB37 319 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 RIT1Q92963 219 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 ZBTB9Q96C00 473 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 SENP5Q96HI0 755 aaPredicted RBP14.78□□□□□ -0.04
UPF3A-208ENST00000484246 SORT1Q99523 831 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 EBPLQ9BY08 206 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 OR8D2Q9GZM6 311 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 ILKAPQ9H0C8 392 aaPredicted RBP14.78□□□□□ -0.04
UPF3A-208ENST00000484246 PFDN4Q9NQP4 134 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.78□□□□□ -0.04
UPF3A-208ENST00000484246 TAS2R7Q9NYW3 318 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 HEY2Q9UBP5 337 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 COPS7AQ9UBW8 275 aa14.78□□□□□ -0.04
UPF3A-208ENST00000484246 ZNF462Q96JM2 2506 aa14.77□□□□□ -0.04
UPF3A-208ENST00000484246 OR6C76A6NM76 312 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 GABRR3A8MPY1 467 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 FCHO1O14526 889 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 MAN1A2O60476 641 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 LINC00032P0C843 101 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 PORP16435 677 aaPredicted RBP14.77□□□□□ -0.05
UPF3A-208ENST00000484246 TNNI3P19429 210 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 SLC1A6P48664 564 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 XKP51811 444 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 BTKQ06187 659 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 BST1Q10588 318 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 FUT7Q11130 342 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 STX3Q13277 289 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 TUBA3CQ13748 450 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 FCRLBQ6BAA4 426 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 TUBA3EQ6PEY2 450 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 TRIM42Q8IWZ5 723 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 GALNT12Q8IXK2 581 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 MDS2Q8NDY4 140 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 KLHL29Q96CT2 875 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 CNRIP1Q96F85 164 aaPredicted RBP14.77□□□□□ -0.05
UPF3A-208ENST00000484246 PPP3R2Q96LZ3 170 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 BARD1Q99728 777 aaKnown RBP14.77□□□□□ -0.05
UPF3A-208ENST00000484246 C20orf27Q9GZN8 174 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 CDCP1Q9H5V8 836 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 SLAMF7Q9NQ25 335 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 FIS1Q9Y3D6 152 aa14.77□□□□□ -0.05
UPF3A-208ENST00000484246 MYOCOSA0A1B0GUC4 107 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 A0A1W2PS29 197 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 HMGB1P1B2RPK0 211 aaPredicted RBP14.76□□□□□ -0.05
UPF3A-208ENST00000484246 PRKNO60260 465 aaPredicted RBP14.76□□□□□ -0.05
UPF3A-208ENST00000484246 TBX19O60806 448 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 SNNO75324 88 aaPredicted RBP14.76□□□□□ -0.05
UPF3A-208ENST00000484246 SEC22BO75396 215 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 LYPLA1O75608 230 aaPredicted RBP14.76□□□□□ -0.05
UPF3A-208ENST00000484246 CLPSP04118 112 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 ERVK-8P63133 956 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 RNF4P78317 190 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 TLE1Q04724 770 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 MAP4K2Q12851 820 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 SMU1Q2TAY7 513 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 RFTN2Q52LD8 501 aaPredicted RBP14.76□□□□□ -0.05
UPF3A-208ENST00000484246 TTMPQ5BVD1 217 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 GPALPP1Q8IXQ4 340 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 DDIASQ8IXT1 998 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 LRRC34Q8IZ02 419 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 LRRC25Q8N386 305 aaPredicted RBP14.76□□□□□ -0.05
UPF3A-208ENST00000484246 ZNF781Q8N8C0 355 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 ZNF321PQ8N8H1 164 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 OR7G1Q8NGA0 311 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 OR5L2Q8NGL0 311 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 AGR3Q8TD06 166 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 ZNF675Q8TD23 568 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 PPWD1Q96BP3 646 aaKnown RBP14.76□□□□□ -0.05
UPF3A-208ENST00000484246 CTHRC1Q96CG8 243 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 ERP27Q96DN0 273 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 C19orf60Q96EN9 201 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 UTP23Q9BRU9 249 aaKnown RBP14.76□□□□□ -0.05
UPF3A-208ENST00000484246 PLA2G3Q9NZ20 509 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 MYOTQ9UBF9 498 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 UTS2RQ9UKP6 389 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 EXO1Q9UQ84 846 aaKnown RBP14.76□□□□□ -0.05
UPF3A-208ENST00000484246 ERVK-19Q9WJR5 959 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 YARS2Q9Y2Z4 477 aaKnown RBP14.76□□□□□ -0.05
UPF3A-208ENST00000484246 POLR3HQ9Y535 204 aaPredicted RBP14.76□□□□□ -0.05
UPF3A-208ENST00000484246 ZNF780BQ9Y6R6 833 aa14.76□□□□□ -0.05
UPF3A-208ENST00000484246 HRKO00198 91 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 KLF11O14901 512 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 PRAMEF2O60811 474 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 NEURL1O76050 574 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 IFI6P09912 130 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 SDC1P18827 310 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 TACR1P25103 407 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 CD96P40200 585 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 ALDH9A1P49189 494 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 HLCSP50747 726 aa14.75□□□□□ -0.05
UPF3A-208ENST00000484246 RPL14P50914 215 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms