RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, human

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR4-213	ENST00000483922	ERVK-6	Q9BXR3	956 aa		11.77	□□□□□ -0.53
UBR4-213	ENST00000483922	ANGPTL4	Q9BY76	406 aa		11.77	□□□□□ -0.53
UBR4-213	ENST00000483922	PITHD1	Q9GZP4	211 aa	Predicted RBP	11.77	□□□□□ -0.53
UBR4-213	ENST00000483922	WWTR1	Q9GZV5	400 aa		11.77	□□□□□ -0.53
UBR4-213	ENST00000483922	GPRC5B	Q9NZH0	403 aa		11.77	□□□□□ -0.53
UBR4-213	ENST00000483922	CTNNAL1	Q9UBT7	734 aa		11.77	□□□□□ -0.53
UBR4-213	ENST00000483922	CORO1C	Q9ULV4	474 aa	Predicted RBP	11.77	□□□□□ -0.53
UBR4-213	ENST00000483922	CAMK2A	Q9UQM7	478 aa		11.77	□□□□□ -0.53
UBR4-213	ENST00000483922	ERVK-19	Q9WJR5	959 aa		11.77	□□□□□ -0.53
UBR4-213	ENST00000483922	WIF1	Q9Y5W5	379 aa		11.77	□□□□□ -0.53
UBR4-213	ENST00000483922	TEX264	Q9Y6I9	313 aa		11.77	□□□□□ -0.53
UBR4-213	ENST00000483922	RTTN	Q86VV8	2226 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	FAM95C	A0A1B0GW59	222 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	EEF1E1-BLOC1S5	C9J1V9	151 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	DNALI1	O14645	258 aa	Predicted RBP	11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	SMAD7	O15105	426 aa	Known RBP	11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	EEF1E1	O43324	174 aa	Known RBP	11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	CPN2	P22792	545 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	GMPR	P36959	345 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	CASP3	P42574	277 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	MSH2	P43246	934 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	RPL21	P46778	160 aa	Known RBP	11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	HSPA7	P48741	367 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	SLAMF1	Q13291	335 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	OR4D1	Q15615	310 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	STEAP4	Q687X5	459 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	ADGRE4P	Q86SQ3	457 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	LUZP2	Q86TE4	346 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	SPATA3	Q8NHX4	192 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	PPP1R14C	Q8TAE6	165 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	SPPL2A	Q8TCT8	520 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	NANOS1	Q8WY41	292 aa	Known RBP	11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	ZNF592	Q92610	1267 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	PTCD3	Q96EY7	689 aa	Known RBP	11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	RBM18	Q96H35	190 aa	Known RBP	11.76	□□□□□ -0.53
UBR4-213	ENST00000483922		Q96MF0	132 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	DOCK7	Q96N67	2140 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	RILP	Q96NA2	401 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	GAL3ST4	Q96RP7	486 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	RBM24	Q9BX46	236 aa	Known RBP	11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	OR51B5	Q9H339	312 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	RPF2	Q9H7B2	306 aa	Known RBP	11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	COPS7B	Q9H9Q2	264 aa	Predicted RBP	11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	CALHM2	Q9HA72	323 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	DNAJC11	Q9NVH1	559 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	GALNT8	Q9NY28	637 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	NPFFR2	Q9Y5X5	522 aa		11.76	□□□□□ -0.53
UBR4-213	ENST00000483922	SH3D21	A4FU49	640 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	DEFB108A	A8MXU0	73 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	TP73	O15350	636 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	IL18BP	O95998	194 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	SERPINB3	P29508	390 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	SSTR4	P31391	388 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	OPRM1	P35372	400 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	CASP2	P42575	452 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	HNRNPH2	P55795	449 aa	Known RBP	11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	TBL3	Q12788	808 aa	Known RBP	11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	CHIT1	Q13231	466 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	RCN2	Q14257	317 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	ZNF267	Q14586	743 aa	Predicted RBP	11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	SPRED3	Q2MJR0	410 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	C22orf34	Q6ZV56	151 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	YRDC	Q86U90	279 aa	Known RBP	11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	LRRC75A-AS1	Q8N1F1	130 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	TRIM58	Q8NG06	486 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	ZPLD1	Q8TCW7	415 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	SMPDL3B	Q92485	455 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	DIO2	Q92813	273 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	HSPBAP1	Q96EW2	488 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	LRRC46	Q96FV0	321 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	CFAP36	Q96G28	342 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	TUBA1C	Q9BQE3	449 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	CAPS2	Q9BXY5	557 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	ZNF717	Q9BY31	904 aa	Predicted RBP	11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	CAB39L	Q9H9S4	337 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	SMYD2	Q9NRG4	433 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	MOCS1	Q9NZB8	636 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	PTBP2	Q9UKA9	531 aa	Known RBP	11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	CHMP2B	Q9UQN3	213 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	C15orf41	Q9Y2V0	281 aa		11.75	□□□□□ -0.53
UBR4-213	ENST00000483922	C2orf72	A6NCS6	295 aa		11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	GLOD5	A6NK44	160 aa		11.74	□□□□□ -0.53
UBR4-213	ENST00000483922		A8MXE2	369 aa		11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	CLGN	O14967	610 aa		11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	STK16	O75716	305 aa		11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	CT62	P0C5K7	136 aa		11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	TMIGD3	P0DMS9	266 aa	Predicted RBP	11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	ALOX15	P16050	662 aa	Predicted RBP	11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	PTPN6	P29350	595 aa		11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	CDC25B	P30305	580 aa		11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	PTGDS	P41222	190 aa		11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	TBCC	Q15814	346 aa		11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	DEPDC1	Q5TB30	811 aa		11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	OR4C11	Q6IEV9	310 aa		11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	ADAMTSL2	Q86TH1	951 aa		11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	LAS2	Q8IYD9	372 aa		11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	PM20D2	Q8IYS1	436 aa		11.74	□□□□□ -0.53
UBR4-213	ENST00000483922	DND1	Q8IYX4	353 aa	Known RBP	11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms