RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 OLR1P78380 273 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 GPLD1P80108 840 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 SIM1P81133 766 aaPredicted RBP13.22□□□□□ -0.29
CLK3-204ENST00000483723 GPR19Q15760 415 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 GARNL3Q5VVW2 1013 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 NKAIN2Q5VXU1 208 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 NIPAL1Q6NVV3 410 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 TNFAIP8L2Q6P589 184 aaPredicted RBP13.22□□□□□ -0.29
CLK3-204ENST00000483723 PATL1Q86TB9 770 aaKnown RBP13.22□□□□□ -0.29
CLK3-204ENST00000483723 SVOPLQ8N434 492 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 OR56A1Q8NGH5 318 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 TANKQ92844 425 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 ANKHQ9HCJ1 492 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 PDE7BQ9NP56 450 aa13.22□□□□□ -0.29
CLK3-204ENST00000483723 PRAMEF27A3QJZ7 478 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 TMEM221A6NGB7 291 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 ZNF860A6NHJ4 632 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 M0R296 226 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 EI24O14681 340 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 MED26O95402 600 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 IFNA14P01570 189 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 FABP3P05413 133 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 PNLIPP16233 465 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 CD1CP29017 333 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 AQP1P29972 269 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 SOX18P35713 384 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 VLDLRP98155 873 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 SQSTM1Q13501 440 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 TP53BP2Q13625 1128 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 NDUFA9Q16795 377 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 TCTE1Q5JU00 501 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 C6orf52Q5T4I8 152 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 TSEN54Q7Z6J9 526 aaKnown RBP13.21□□□□□ -0.3
CLK3-204ENST00000483723 LRRC25Q8N386 305 aaPredicted RBP13.21□□□□□ -0.3
CLK3-204ENST00000483723 TMEM105Q8N8V8 129 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 DTWD2Q8NBA8 298 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 TMEM52Q8NDY8 209 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 OR5T3Q8NGG3 340 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 OR9A2Q8NGT5 310 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 OR5K1Q8NHB7 308 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 SAP25Q8TEE9 199 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 TFAP2CQ92754 450 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 DUSP23Q9BVJ7 150 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 OR51I1Q9H343 314 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 C3orf14Q9HBI5 128 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 PADI2Q9Y2J8 665 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 ARID1BQ8NFD5 2236 aaPredicted RBP13.21□□□□□ -0.3
CLK3-204ENST00000483723 CACNA1EQ15878 2313 aa13.21□□□□□ -0.3
CLK3-204ENST00000483723 PI4KAP42356 2102 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 MAGEA13PA6NCF6 341 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 H3BMH7 237 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 SGK494L7N484 410 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 CHST10O43529 356 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 PGM3O95394 542 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 GPR75O95800 540 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 ALPPL2P10696 532 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 CPMP14384 443 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 PORP16435 677 aaPredicted RBP13.2□□□□□ -0.3
CLK3-204ENST00000483723 ZNF23P17027 643 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 CNR2P34972 360 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 HOXD12P35452 270 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 DCTP40126 519 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 MAN2A2P49641 1150 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 ANXA11P50995 505 aaKnown RBP13.2□□□□□ -0.3
CLK3-204ENST00000483723 PRR5P85299 388 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 DAG1Q14118 895 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 PDK3Q15120 406 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 OR2T5Q6IEZ7 315 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 TMEM107Q6UX40 140 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 PLXDC1Q8IUK5 500 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 CHERPQ8IWX8 916 aaKnown RBP13.2□□□□□ -0.3
CLK3-204ENST00000483723 SHISA5Q8N114 240 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 OR9A4Q8NGU2 314 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 OR2T29Q8NH02 315 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 PIGKQ92643 395 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 RAB8BQ92930 207 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 GIMAP5Q96F15 307 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 TMEM19Q96HH6 336 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 AHCYL2Q96HN2 611 aaKnown RBP13.2□□□□□ -0.3
CLK3-204ENST00000483723 OSBPL10Q9BXB5 764 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 BCL2L10Q9HD36 194 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 USE1Q9NZ43 259 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 ABCG2Q9UNQ0 655 aa13.2□□□□□ -0.3
CLK3-204ENST00000483723 MN1Q10571 1320 aaPredicted RBP13.2□□□□□ -0.3
CLK3-204ENST00000483723 HYKKA2RU49 373 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 G3V2T6 193 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 YKT6O15498 198 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 DUX1O43812 170 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 NSA2O95478 260 aaKnown RBP13.19□□□□□ -0.3
CLK3-204ENST00000483723 HPRP00739 348 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 HMGN2P05204 90 aaKnown RBP13.19□□□□□ -0.3
CLK3-204ENST00000483723 OR12D1P0DN82 309 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 MLLT3P42568 568 aaPredicted RBP13.19□□□□□ -0.3
CLK3-204ENST00000483723 KHKP50053 298 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 ALDH3A2P51648 485 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 ARSFP54793 590 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 SKP1P63208 163 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 BLMHQ13867 455 aa13.19□□□□□ -0.3
CLK3-204ENST00000483723 HLA-BQ31612 363 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms