RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 BEST4Q8NFU0 473 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 OR4F15Q8NGB8 312 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 SLC38A5Q8WUX1 472 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 SDHCQ99643 169 aaPredicted RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 MED28Q9H204 178 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 ZC4H2Q9NQZ6 224 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 TAC3Q9UHF0 121 aa12.09□□□□□ -0.47
VPS52-218ENST00000482399 ZFR2Q9UPR6 939 aaKnown RBP12.09□□□□□ -0.47
VPS52-218ENST00000482399 PRAMEF25A6NGN4 478 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 FAM183AA6NL82 134 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 TNFRSF10AO00220 468 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 ORC5O43913 435 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 FCER2P06734 321 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 ZDHHC11BP0C7U3 371 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 CYBAP13498 195 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 CBLP22681 906 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 ACVR2AP27037 513 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 ETV5P41161 510 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SLC6A12P48065 614 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SLC9A3P48764 834 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 ETV1P50549 477 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 LIM2P55344 173 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 ZNF267Q14586 743 aaPredicted RBP12.08□□□□□ -0.48
VPS52-218ENST00000482399 GPR19Q15760 415 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SLC30A6Q6NXT4 461 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 C16orf62Q7Z3J2 963 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 C6orf120Q7Z4R8 191 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 TMEM25Q86YD3 366 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 PEX5LQ8IYB4 626 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 ZNF480Q8WV37 535 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 ARSGQ96EG1 525 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SYT17Q9BSW7 474 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 CHIAQ9BZP6 476 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 PPIL3Q9H2H8 161 aaKnown RBP12.08□□□□□ -0.48
VPS52-218ENST00000482399 CXorf36Q9H7Y0 433 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 CACYBPQ9HB71 228 aaKnown RBP12.08□□□□□ -0.48
VPS52-218ENST00000482399 PLCXD1Q9NUJ7 323 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 GPATCH2Q9NW75 528 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 ZNF224Q9NZL3 707 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 EXTL2Q9UBQ6 330 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SH2B3Q9UQQ2 575 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 PCDHGB2Q9Y5G2 931 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 GREB1Q4ZG55 1949 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SPTBP11277 2137 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 KCNE1BA0A087WTH5 132 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 H7BY64 318 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SOCS5O75159 536 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 DDX5P17844 614 aaKnown RBP12.08□□□□□ -0.48
VPS52-218ENST00000482399 FKBP1BP68106 108 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 ZNF79Q15937 498 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 MPPE1Q53F39 396 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 LUZP2Q86TE4 346 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 NPAS4Q8IUM7 802 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SLC43A3Q8NBI5 491 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SLC7A13Q8TCU3 470 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 CHAC2Q8WUX2 184 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 PRAP1Q96NZ9 151 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SRRQ9GZT4 340 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 MVB12BQ9H7P6 319 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 ASCC3Q8N3C0 2202 aaKnown RBP12.08□□□□□ -0.48
VPS52-218ENST00000482399 LOC105369274A0A096LPK9 316 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SNTNA6NMZ2 147 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 OR1F1O43749 312 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SSNA1O43805 119 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 CYP2A6P11509 494 aaPredicted RBP12.08□□□□□ -0.48
VPS52-218ENST00000482399 HLA-FP30511 346 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SOX18P35713 384 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SSR2P43308 183 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 TLE2Q04725 743 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 RBBP4Q09028 425 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 PLEKHS1Q5SXH7 462 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 GRHL2Q6ISB3 625 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 ARL9Q6T311 187 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 TSEN54Q7Z6J9 526 aaKnown RBP12.08□□□□□ -0.48
VPS52-218ENST00000482399 KLBQ86Z14 1044 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 OR4N4Q8N0Y3 316 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 OR51G2Q8NGK0 314 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.08□□□□□ -0.48
VPS52-218ENST00000482399 KLK6Q92876 244 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SLC38A2Q96QD8 506 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 CLSTN3Q9BQT9 956 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 OR51V1Q9H2C8 321 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 ZNF334Q9HCZ1 680 aaPredicted RBP12.08□□□□□ -0.48
VPS52-218ENST00000482399 AHSPQ9NZD4 102 aa12.08□□□□□ -0.48
VPS52-218ENST00000482399 SH3D21A4FU49 640 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 ZNF670-ZNF695F2Z2N8 137 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 PDPK1O15530 556 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 LYRM1O43325 122 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 GPR37L1O60883 481 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 PRKRAO75569 313 aaKnown RBP12.07□□□□□ -0.48
VPS52-218ENST00000482399 NTN1O95631 604 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 RAB36O95755 333 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 RPLP2P05387 115 aaKnown RBP12.07□□□□□ -0.48
VPS52-218ENST00000482399 CTGFP29279 349 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 SSTR2P30874 369 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 CDH11P55287 796 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 DCDC1P59894 354 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 GALK2Q01415 458 aa12.07□□□□□ -0.48
VPS52-218ENST00000482399 RPL6Q02878 288 aaKnown RBP12.07□□□□□ -0.48
VPS52-218ENST00000482399 E2F2Q14209 437 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms