RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 NDUFAF5Q5TEU4 345 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 PRAMEF20Q5VT98 475 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 TMEM211Q6ICI0 200 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 MEX3BQ6ZN04 569 aaKnown RBP17.12■□□□□ 0.33
CLK1-211ENST00000481641 RGS9BPQ6ZS82 235 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 TRILQ7L0X0 811 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 FAM109AQ8N4B1 249 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 MMGT1Q8N4V1 131 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 SLC22A8Q8TCC7 542 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 ZNF592Q92610 1267 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 RIT1Q92963 219 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 SMC6Q96SB8 1091 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 PAFAH2Q99487 392 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 FUT8Q9BYC5 575 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 SH2D2AQ9NP31 389 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 XPR1Q9UBH6 696 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 PCTPQ9UKL6 214 aa17.12■□□□□ 0.33
CLK1-211ENST00000481641 PHF3Q92576 2039 aaKnown RBP17.12■□□□□ 0.33
CLK1-211ENST00000481641 TEP1Q99973 2627 aaKnown RBP17.11■□□□□ 0.33
CLK1-211ENST00000481641 INTS1Q8N201 2190 aaKnown RBP17.11■□□□□ 0.33
CLK1-211ENST00000481641 A0A1B0GTL3 188 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 POC1B-GALNT4F8VUJ3 575 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 FOXE1O00358 373 aaPredicted RBP17.11■□□□□ 0.33
CLK1-211ENST00000481641 IGHG3P01860 377 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 RBP1P09455 135 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 BIKQ13323 160 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 SGO1Q5FBB7 561 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 SLC22A10Q63ZE4 541 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 ZNF585AQ6P3V2 769 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 TMEM64Q6YI46 380 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 RNF111Q6ZNA4 994 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 NUDT13Q86X67 352 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 RELL1Q8IUW5 271 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 C7orf57Q8NEG2 295 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 OR5M3Q8NGP4 307 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 RND1Q92730 232 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 ISL2Q96A47 359 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 SPACA9Q96E40 222 aaPredicted RBP17.11■□□□□ 0.33
CLK1-211ENST00000481641 ART5Q96L15 291 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 ENKD1Q9H0I2 346 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 PROK2Q9HC23 129 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 TEX10Q9NXF1 929 aaPredicted RBP17.11■□□□□ 0.33
CLK1-211ENST00000481641 PSD3Q9NYI0 1048 aa17.11■□□□□ 0.33
CLK1-211ENST00000481641 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.11■□□□□ 0.33
CLK1-211ENST00000481641 HCFC1P51610 2035 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 PPP6CO00743 305 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 RFPL3SP0C7P2 107 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 ELAVL4P26378 380 aaKnown RBP17.1■□□□□ 0.33
CLK1-211ENST00000481641 ECHS1P30084 290 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 SSTR4P31391 388 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 SLC37A1P57057 533 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 TRAF3Q13114 568 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 EBPQ15125 230 aaKnown RBP17.1■□□□□ 0.33
CLK1-211ENST00000481641 SPRED3Q2MJR0 410 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 FRG2Q64ET8 278 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 TTC19Q6DKK2 380 aaPredicted RBP17.1■□□□□ 0.33
CLK1-211ENST00000481641 METTL2BQ6P1Q9 378 aaKnown RBP17.1■□□□□ 0.33
CLK1-211ENST00000481641 SLC29A4Q7RTT9 530 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 FAM13CQ8NE31 585 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 OR10G3Q8NGC4 313 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 PAQR8Q8TEZ7 354 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 DCAKDQ8WVC6 231 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 FRG2BQ96QU4 278 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 SERPINI1Q99574 410 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 SPOCK3Q9BQ16 436 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 MRPL1Q9BYD6 325 aaKnown RBP17.1■□□□□ 0.33
CLK1-211ENST00000481641 WWTR1Q9GZV5 400 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 LDAHQ9H6V9 325 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 WDR41Q9HAD4 459 aa17.1■□□□□ 0.33
CLK1-211ENST00000481641 A0A1B0GVC2 190 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 TRIM49D1C9J1S8 452 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 STX16-NPEPL1H3BU86 382 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 STX16O14662 325 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 SMIM24O75264 130 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 KLK1P06870 262 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 FBXO45P0C2W1 286 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 CT62P0C5K7 136 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 SLC35E2P0CK97 266 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 TSPAN8P19075 237 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 SSTR2P30874 369 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 SLC10A1Q14973 349 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 HYAL4Q2M3T9 481 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 SLC15A4Q8N697 577 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 ACBD4Q8NC06 268 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 OR4F6Q8NGB9 312 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 LILRB4Q8NHJ6 448 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 ASB5Q8WWX0 329 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 FMO2Q99518 471 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 PELOQ9BRX2 385 aaKnown RBP17.09■□□□□ 0.33
CLK1-211ENST00000481641 NTMT1Q9BV86 223 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 EXO5Q9H790 373 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 NPDC1Q9NQX5 325 aaPredicted RBP17.09■□□□□ 0.33
CLK1-211ENST00000481641 FARSBQ9NSD9 589 aaKnown RBP17.09■□□□□ 0.33
CLK1-211ENST00000481641 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.09■□□□□ 0.335e-6■□□□□ 10.5
CLK1-211ENST00000481641 CHCHD2Q9Y6H1 151 aaPredicted RBP17.09■□□□□ 0.33
CLK1-211ENST00000481641 IKBKGQ9Y6K9 419 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 FREM3P0C091 2139 aa17.09■□□□□ 0.33
CLK1-211ENST00000481641 BCKDKO14874 412 aa17.08■□□□□ 0.32
CLK1-211ENST00000481641 TOXO94900 526 aa17.08■□□□□ 0.32
CLK1-211ENST00000481641 SBK3P0C264 359 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms